2JA5
cpd lesion containing rna polymerase ii elongation complex a
Total interactions analyzed 91
Total true interactions 30
Strongest Interaction Chains A-B
Int. Res. 767
Norm. En. per Res. -4.1924
Hub Node B(10)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -355.2258 -327.3978 -2532.92 -3215.5436 767 242 63 110052 26 262 238
A-C -11.8871 1.3384 -65.1401 -75.6889 51 6 0 3013 0 16 19
A-D 0.0 -10.7428 -23.1096 -33.8524 31 2 1 1476 0 11 4
A-E -70.1415 -84.7949 -535.902 -690.8384 210 40 14 23501 7 79 65
A-F -74.3611 -53.1733 -483.524 -611.0584 176 35 15 21196 2 64 56
A-G -13.8101 -72.9292 -120.151 -206.8903 67 13 5 5652 3 22 15
A-H -69.8121 -22.7368 -355.521 -448.0698 138 54 13 17064 4 35 35
A-I -96.8027 -33.5258 -430.125 -560.4535 138 44 11 17383 6 54 49
A-K -28.4996 -33.1435 -243.375 -305.018 90 29 8 9959 3 23 20
B-C -82.018 -108.5132 -431.608 -622.1392 167 42 4 17773 9 55 60
B-D -6.3135 -16.6896 -47.7204 -70.7235 34 5 1 2548 2 16 19
B-E 0.0 0.0 -1.9287 -1.9287 9 3 0 346 0 2 1
B-F -14.1582 -14.6943 -17.0416 -45.8941 27 2 0 676 1 7 8
B-G -7.8482 -3.0625 -9.1956 -20.1063 27 1 0 816 0 7 4
B-H 0.0 0.0 -0.7315 -0.7315 2 0 0 53 0 0 0
B-I -3.7019 -61.953 -251.565 -317.2199 133 22 2 13300 4 51 50
B-J -25.6474 -27.0394 -373.294 -425.9808 138 41 6 18166 3 35 37
B-K -10.7167 -12.7198 -77.8367 -101.2732 57 13 0 3383 2 16 18
B-L -53.6318 -59.6949 -208.33 -321.6567 109 15 9 10562 6 44 43
C-H 0.0 -3.2498 -29.1783 -32.4281 24 0 1 1445 0 8 7
C-J -59.2106 -46.2174 -214.637 -320.065 106 46 11 12588 6 38 26
C-K -18.2134 -25.0996 -416.64 -459.953 153 47 17 21872 5 46 45
C-L -34.6534 -77.8521 -132.362 -244.8675 59 14 8 5750 7 23 16
D-F 0.0 0.0 -0.6561 -0.6561 6 0 0 125 0 1 2
D-G -42.0342 5.4188 -510.553 -547.1685 199 54 22 24377 7 60 51
E-F -10.9522 -25.0644 -26.0192 -62.0358 23 5 0 1307 1 7 5
F-G -6.7298 -10.3326 -101.736 -118.7984 56 8 1 4994 1 11 12
H-K 0.0 0.0 -20.6185 -20.6185 24 1 0 1467 0 4 5
J-L 0.0 0.0 -10.7001 -10.7001 10 0 0 523 0 1 1
K-L 0.0 8.3076 -1.3471 6.9605 5 0 0 201 0 3 2