2J9D
structure of glnk1 with bound effectors indicates regulatory mechanism for ammonia uptake
Total interactions analyzed 66
Total true interactions 36
Strongest Interaction Chains J-L
Int. Res. 115
Norm. En. per Res. -5.6537
Hub Node A(5)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -118.4799 -92.2919 -322.517 -533.2889 105 19 15 13998 10 56 60
A-C -137.7432 -96.3487 -332.41 -566.502 107 24 14 14165 11 55 58
A-D 0.0 0.0 -0.011 -0.011 6 0 0 11 0 0 2
A-E 0.0 0.0 -0.1049 -0.1049 2 0 0 12 0 3 1
A-F 0.0 -2.3712 -51.1107 -53.4819 36 0 2 2344 2 23 15
B-C -167.7069 -66.6353 -372.334 -606.6761 114 25 16 15527 10 55 57
B-D 0.0 0.0 -0.0081 -0.0081 2 0 0 1 0 1 1
B-E -7.5585 3.5924 -78.6814 -82.6475 63 6 0 4344 4 38 32
B-F 0.0 0.3788 -5.7597 -5.3809 12 0 0 364 1 4 5
C-D 0.0 -20.0083 -51.2383 -71.2466 33 3 2 2227 0 21 15
C-E -41.4923 -36.068 -75.1723 -152.7326 36 10 6 3150 2 15 15
D-E -141.0801 -87.9668 -397.391 -626.4379 119 26 16 16485 13 62 66
D-F -135.6051 -67.6844 -322.552 -525.8415 105 24 14 13967 9 51 56
D-G 0.0 6.2118 -0.331 5.8808 9 0 0 65 0 5 6
D-H -12.7843 23.9738 -22.4744 -11.2849 22 2 0 1011 2 19 18
E-F -167.1745 -86.7165 -349.76 -603.651 113 27 14 14849 11 56 60
E-G -16.7162 15.3013 -19.3379 -20.7528 18 1 0 627 0 14 12
E-H 0.0 0.0 -0.0314 -0.0314 2 0 0 3 0 0 1
E-I 0.0 6.3252 -0.3185 6.0067 7 0 0 59 0 5 6
F-G 0.0 0.0 -0.0364 -0.0364 2 0 0 3 0 0 1
F-H 0.0 33.7919 -19.8407 13.9512 25 1 0 816 0 17 20
F-I -11.5982 22.2104 -24.8392 -14.227 25 3 0 976 2 20 17
G-H -162.1802 -83.4212 -341.641 -587.2424 110 36 15 14964 10 54 59
G-I -128.995 -101.7908 -325.764 -556.5498 105 26 15 13773 10 55 56
G-J 0.0 2.2429 -75.3501 -73.1072 60 6 3 4384 0 37 34
G-K 0.0 0.0 -0.2573 -0.2573 3 0 0 60 0 4 3
G-L 0.0 12.9896 -0.5283 12.4613 4 0 0 30 0 2 2
H-I -136.2091 -69.1822 -327.935 -533.3263 111 33 15 14533 10 53 57
H-J 0.0 0.0 -0.0007 -0.0007 2 0 0 2 0 1 2
H-K 0.0 17.5899 -0.8754 16.7145 5 0 0 35 0 4 2
H-L 0.0 8.4088 -58.2677 -49.8589 48 3 2 3010 1 24 22
I-J 0.0 20.9707 -1.534 19.4367 7 0 0 125 0 4 4
I-K -19.5673 -11.057 -83.7343 -114.3587 60 8 2 4358 2 36 35
J-K -158.2927 -87.8332 -311.576 -557.7019 103 29 16 13364 11 50 57
J-L -187.3427 -99.472 -363.362 -650.1768 115 26 15 15088 11 51 55
K-L -166.1568 -83.2298 -333.447 -582.8335 115 40 15 15320 12 55 58