2J7A
crystal structure of cytochrome c nitrite reductase nrfha complex from desulfovibrio vulgaris
Total interactions analyzed 153
Total true interactions 44
Strongest Interaction Chains B-C
Int. Res. 118
Norm. En. per Res. -5.0329
Hub Node A(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
Download
Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -17.7705 -24.8847 -287.092 -329.7472 151 19 13 11935 4 37 41
A-C -47.3817 -30.3975 -264.554 -342.3332 92 10 4 10745 5 37 39
A-D -65.4368 -35.4103 -173.686 -274.5331 106 18 0 7937 11 78 71
A-E 0.0 8.961 -1.6871 7.2739 8 0 0 77 0 1 4
A-F -20.8169 -35.6095 -92.1406 -148.567 45 4 0 3453 3 19 16
B-C -87.2199 -101.0159 -405.648 -593.8838 118 17 5 16203 8 51 45
B-D 0.0 0.0 26.4183 26.4183 14 4 0 216 3 1 4
B-H -12.6554 -0.4027 -36.3387 -49.3968 31 1 0 1448 0 13 15
C-D -23.4116 -11.7559 -84.2175 -119.385 44 3 0 3304 3 19 16
C-E 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 0
C-F 0.0 0.0 -125.31 -125.31 78 4 10 5632 0 4 7
D-E -6.6278 -20.5149 -153.064 -180.2067 153 20 13 11581 8 36 41
D-F -47.299 -29.505 -264.552 -341.3561 95 5 4 10836 1 37 40
D-M 0.0 0.0 -9.7085 -9.7085 22 0 1 643 0 5 2
D-N -7.6478 0.7586 -46.7222 -53.6114 29 1 2 2109 0 4 1
E-F -74.8958 -87.8312 -361.432 -524.159 121 20 5 15856 6 48 46
E-M 0.0 0.0 -4.4516 -4.4516 7 0 0 95 0 0 0
E-N -3.9603 -10.218 -47.6233 -61.8017 34 2 0 1874 1 11 7
G-H 0.0 -27.1459 -291.206 -318.3519 142 11 13 11904 4 38 42
G-I -62.8147 -28.7269 -264.485 -356.0266 96 10 4 10781 5 37 40
G-J -75.0715 -40.6902 -168.708 -284.4696 106 12 0 7921 14 79 72
G-K 0.0 0.0 -1.9244 -1.9244 8 0 0 74 0 1 4
G-L -23.8332 -15.8687 -86.0143 -125.7162 43 4 0 3368 4 19 15
H-I -69.4818 -79.0837 -400.497 -549.0625 120 15 4 15857 7 48 46
H-J 0.0 0.0 -1.3108 -1.3108 4 0 0 53 0 1 4
H-L 0.0 0.0 -0.0006 -0.0006 2 0 0 2 0 0 0
I-J -25.3011 -13.6092 -85.0133 -123.9236 44 4 0 3349 3 19 16
I-K 0.0 0.0 -0.0008 -0.0008 2 0 0 2 0 0 0
I-L 0.0 0.0 -132.536 -132.536 76 3 12 5851 0 4 7
J-K -5.8844 -26.0853 -266.414 -298.3837 142 11 13 11430 4 38 43
J-L -54.9471 -21.7887 -263.143 -339.8788 92 9 4 10710 5 37 39
K-L -46.6516 -97.3225 -367.949 -511.9231 124 26 6 16008 8 50 46
M-N -21.5585 -24.6343 -285.495 -331.6878 149 13 14 11920 4 38 44
M-O -47.2884 -25.2093 -262.221 -334.7187 93 9 4 10756 5 37 40
M-P -58.8839 -39.5921 -181.944 -280.4199 106 12 0 7899 16 79 74
M-Q 0.0 0.0 -1.3358 -1.3358 8 0 0 67 0 0 2
M-R -10.5908 -22.7644 9 ARG40R, ASN63R, ASP29M, ASP328M, ASP38R, ASP68R, LYS149R, LYS35R, THR32M
N-O -73.3256 -81.5344 -412.653 -567.513 122 19 5 16504 7 50 47
N-P 0.0 0.0 -9.5403 -9.5403 24 8 0 439 0 1 4
O-P -35.537 -17.3145 -84.5687 -137.4202 44 5 0 3489 3 19 16
O-Q 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 0
P-Q -9.3143 -19.8695 0.0 -29.1838 16 0 0 0 0 0 0
P-R -53.5819 -24.838 23 ARG141R, ARG147R, ARG221P, ARG225P, ASN124R, ASN222P, ASP138R, ASP318P, ASP327P, ASP355P, GLU126R, GLU131R, GLU33P, GLY313P, HIS353P, LYS117R, LYS133R, LYS149R, LYS330P, LYS331P, LYS356P, LYS59P, THR123R
Q-R -70.9785 -84.0569 31 ARG141R, ARG147R, ARG154R, ARG221Q, ARG325Q, ARG347Q, ARG350Q, ARG40R, ASP100R, ASP138R, ASP158R, ASP29Q, ASP318Q, ASP328Q, ASP343Q, ASP355Q, GLN351Q, GLU155R, GLY99R, HIS353Q, HIS47R, HIS97R, ILE151R, LYS329Q, LYS330Q, LYS331Q, LYS57R, SER152R, THR324Q, VAL156R, VAL30Q