2J37

model of mammalian srp bound to 80s rncs

• Total interactions analyzed: 28
• Total true interactions: 5
• Strongest Interaction:
  • Chains: B-W
  • Int. Res.: 20
  • Norm. En. per Res.: -1.0269
• Hub Node: 4(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
4-5	-15.602	5.75	638.648	628.796	40	138	4	4435	0	3	10
4-W	-272.2233	-4.2606	818.344	541.8601	29	164	1	2832	0	3	7
5-W	-4.3662	0.0	408.064	403.6978	42	60	1	3217	0	7	7
B-W	0.0	-5.8905	-14.6466	-20.5371	20	0	0	894	0	6	6
S-W	-15.998	-2.1321	1908.68	1890.5499	86	345	7	13357	0	8	7

Interface residues

• 4-5: ALA1464, ALA395, ALA565, ARG345, ARG525, GLN325, GLN365, GLN694, GLN714, GLY315, ILE1494, ILE355, ILE485, ILE555, ILE724, ILE954, LEU235, LEU305, LEU335, LEU595, LEU734, LEU774, LYS1484, LYS275, LYS375, LYS744, MET1124, MET834, PHE944, PRO764, SER405, SER415, THR285, THR784, THR794, TYR1134, TYR754, VAL385, VAL934, VAL964
• 4-W: ALA1424, ALA1464, ALA66W, ASN1474, ASN70W, ASP1144, ASP1444, GLN488W, GLU64W, GLU804, GLY68W, HIS77W, ILE1154, ILE1494, LEU1434, LEU69W, LEU924, LYS1484, LYS71W, LYS73W, MET1124, MET65W, MET74W, PHE487W, PRO764, SER67W, TYR1134, TYR1404, VAL1454
• 5-W: ALA20W, ALA245, ARG15W, ARG475, ARG72W, ASN19W, ASN24W, ASN70W, ASP505, GLN225, GLN325, GLN365, GLU255, GLU26W, GLU295, GLY315, GLY425, GLY68W, ILE22W, ILE23W, ILE355, ILE485, ILE515, LEU235, LEU265, LEU305, LEU335, LEU69W, LYS215, LYS275, LYS445, LYS55, LYS71W, LYS73W, MET65W, SER18W, SER405, SER435, SER545, THR21W, THR285, VAL65
• B-W: ALA407W, ARG405W, ARG408W, ARG415W, ARG74B, ARG79B, ASN73B, ASP416W, ASP75B, GLN404W, GLU71B, GLY409W, GLY411W, LYS374W, MET67B, SER410W, SER413W, THR414W, TRP72B, VAL412W
• S-W: ALA370W, ALA428W, ALA478W, ARG371W, ARG415W, ASN338W, ASN364W, ASN55S, ASP331W, ASP358W, ASP416W, GLN335W, GLN337W, GLN347W, GLN366W, GLN423W, GLN429W, GLN481W, GLN64S, GLU367W, GLU419W, GLY343W, GLY350W, GLY354W, GLY356W, GLY363W, GLY435W, GLY436W, GLY475W, GLY476W, GLY479W, GLY51S, HIS324W, HIS65S, ILE339W, ILE348W, ILE352W, ILE54S, LEU349W, LEU372W, LEU375W, LEU420W, LEU440W, LEU480W, LEU50S, LEU57S, LEU59S, LYS306W, LYS341W, LYS362W, LYS374W, LYS426W, LYS432W, LYS433W, LYS66S, MET340W, MET342W, MET351W, MET360W, MET369W, MET430W, MET434W, MET477W, MET483W, PHE336W, PHE355W, PHE359W, PHE427W, PHE52S, PHE56S, PRO353W, PRO53S, SER346W, SER361W, SER368W, SER482W, THR357W, THR422W, THR425W, THR58S, THR62S, TYR424W, TYR60S, VAL431W, VAL61S, VAL63S