2IY4
x-ray structure of dps from listeria monocytogenes
Total interactions analyzed 276
Total true interactions 67
Strongest Interaction Chains N-P
Int. Res. 114
Norm. En. per Res. -4.2608
Hub Node D(6)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-C -60.0438 -28.4131 -369.851 -458.3079 114 17 9 13562 7 40 29
A-E -2.4366 -16.6346 -106.147 -125.2182 55 4 2 4558 3 19 21
A-H -30.3697 -19.6969 -143.053 -193.1196 50 4 3 4956 2 13 17
A-I -9.0575 -18.3592 -105.027 -132.4437 53 2 2 4542 3 20 22
A-K -23.9701 -16.0679 -120.737 -160.775 47 6 3 4433 2 11 16
B-D -56.2011 -38.0972 -361.882 -456.1804 115 15 9 13599 9 40 29
B-F -24.6052 -21.3237 -148.184 -194.1129 51 5 3 4982 2 12 16
B-G -3.2924 -13.0006 -105.06 -121.353 54 2 3 4523 3 20 21
B-J -28.6357 -19.5956 -146.398 -194.6293 51 10 3 5013 2 14 19
B-L -9.1329 -21.7866 -104.187 -135.1065 53 2 3 4533 3 18 23
C-E -27.1398 -18.5845 -145.572 -191.2962 50 6 3 4960 2 14 17
C-H -2.9574 -13.4832 -104.138 -120.5786 54 2 3 4539 3 18 22
C-J -2.369 -6.3522 -101.44 -110.1612 53 3 3 4402 2 18 22
C-L -21.8565 -20.744 -145.509 -188.1095 51 8 3 5001 2 13 18
D-F -5.8584 -9.0788 -104.367 -119.3041 54 2 3 4509 3 20 22
D-G -23.0594 -22.1076 -145.673 -190.8401 52 6 3 4965 2 13 19
D-I -35.0115 -19.1612 -153.585 -207.7578 52 6 3 5118 2 13 17
D-K -3.2621 -9.8557 -102.697 -115.8148 54 2 2 4525 3 19 22
D-N 0.0 -11.1927 -10.1934 -21.3861 20 0 0 409 2 9 9
D-P -8.5868 20.7452 -28.8344 -16.6759 25 2 0 1221 2 12 10
E-G -54.8503 -31.7573 -363.525 -450.1326 114 19 9 13713 7 39 29
E-I 0.0 -15.9688 -107.831 -123.7998 53 2 3 4593 3 19 22
E-L -25.9685 -19.7239 -145.327 -191.0194 50 7 3 4957 2 11 18
F-H -71.7224 -32.6274 -358.377 -462.7269 114 14 9 13283 7 39 29
F-J -22.6616 -21.5949 -151.011 -195.2675 49 7 3 4996 2 14 17
F-K -3.082 -10.0733 -108.555 -121.7103 55 1 3 4602 3 20 21
G-I -24.1834 -21.042 -146.233 -191.4584 51 11 3 5025 2 13 19
G-L 0.0 -13.0505 -104.612 -117.6625 52 2 3 4621 3 19 21
G-N 0.0 0.0115 -7.7988 -7.7873 25 0 0 473 1 12 9
G-P 0.0 -2.4712 -8.3557 -10.8269 13 0 0 496 0 5 5
G-S 0.0 0.0 -0.0022 -0.0022 2 0 0 1 0 1 0
H-J 0.0 -15.9819 -102.703 -118.6849 53 1 3 4454 3 19 22
H-K -17.9485 -17.6581 -148.786 -184.3926 48 2 3 4950 2 13 18
I-K -54.6708 -47.2537 -361.501 -463.4256 112 10 9 13431 8 41 29
I-N 0.0 2.6148 -20.1171 -17.5023 35 0 0 1170 0 28 16
I-P 0.0 0.0 -0.0942 -0.0942 2 0 0 28 0 1 2
J-L -48.2258 -31.7449 -369.035 -449.0056 115 14 9 13562 7 40 30
M-O -47.3879 -36.1897 -362.165 -445.7426 116 19 9 13447 7 40 29
M-Q -2.5859 -13.3963 -102.188 -118.1702 53 1 3 4457 3 19 22
M-T -33.5793 -20.8516 -153.769 -208.1999 51 5 3 5033 2 14 18
M-U -3.5206 -10.8705 -105.247 -119.6381 53 2 3 4554 3 20 23
M-X -25.3177 -19.5916 -147.678 -192.5873 50 3 3 4929 2 12 17
N-P -75.5011 -39.5728 -370.661 -485.7348 114 11 9 13645 8 40 29
N-R -27.8628 -20.0689 -148.906 -196.8377 52 4 3 5030 2 13 17
N-S -3.664 -15.6776 -104.837 -124.1785 54 1 3 4560 3 20 23
N-V -30.9522 -18.7522 -150.961 -200.6654 50 6 3 5012 2 13 18
N-Y -4.4442 -14.2046 -100.425 -119.0739 52 1 3 4483 3 20 22
O-Q -27.7849 -20.5153 -147.588 -195.8882 50 8 3 4971 2 14 17
O-T 0.0 -16.4308 -106.636 -123.0668 55 2 2 4562 3 17 23
O-V -2.1603 -11.3177 -101.194 -114.672 52 1 2 4405 3 18 22
O-Y -24.9401 -21.796 -142.741 -189.4771 49 5 3 4924 2 13 17
P-R -7.2576 -14.8118 -107.04 -129.1094 53 1 3 4628 3 20 22
P-S -23.1924 -22.1596 -148.557 -193.909 50 10 3 5023 2 12 18
P-U -32.2526 -19.8616 -148.997 -201.1112 52 10 3 5068 2 13 17
P-X -3.411 -18.4968 -104.722 -126.6299 53 3 3 4587 3 19 22
Q-S -45.3035 -32.3602 -363.647 -441.3108 114 11 9 13372 8 40 29
Q-U -2.9307 -15.6581 -108.787 -127.3758 54 2 3 4583 3 19 22
Q-Y -28.8811 -20.8282 -144.546 -194.2554 49 4 3 4886 2 14 18
R-T -55.7162 -22.5723 -350.912 -429.2005 114 16 9 13369 7 40 29
R-V -22.0088 -20.0728 -149.373 -191.4546 49 4 3 4951 2 12 16
R-X -2.9131 -18.5304 -103.756 -125.1995 55 0 3 4468 3 19 22
S-U -18.7055 -21.0727 -150.218 -189.9962 49 7 3 5118 2 13 18
S-Y -3.1447 -14.5482 -104.962 -122.6548 55 2 3 4586 3 19 22
T-V -2.588 -13.3506 -102.716 -118.6546 53 2 3 4517 3 20 22
T-X -28.4067 -21.5824 -147.75 -197.7391 51 5 3 4992 2 12 17
U-X -56.5483 -27.3106 -360.375 -444.2339 114 15 9 13593 6 40 30
V-Y -64.1177 -34.653 -371.572 -470.3427 114 10 9 13594 6 40 29