2IVK

crystal structure of the periplasmic endonuclease vvn complexed with a 16-bp dna

• Total interactions analyzed: 45
• Total true interactions: 2
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 42
  • Norm. En. per Res.: -1.66
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-17.2069	-2.1046	-50.4084	-69.7199	42	3	0	2254	0	7	22
C-D	-9.1198	-1.8323	-47.9457	-58.8978	43	6	0	2407	0	9	22

Interface residues

• A-B: ARG158A, ARG158B, ARG91A, ARG91B, ARG99A, ARG99B, ASN101A, ASN101B, ASN154A, ASN154B, ASP142A, ASP142B, CYS102A, CYS93A, CYS93B, GLN157A, GLN157B, GLN92A, GLN92B, GLN95A, GLN95B, GLY97A, GLY97B, GLY98A, GLY98B, HIS89A, HIS89B, HIS90A, HIS90B, LYS100A, LYS156A, LYS156B, LYS159A, LYS159B, LYS96A, LYS96B, PHE155A, TRP85A, TRP85B, TRP94A, TRP94B, VAL141B
• C-D: ARG158C, ARG158D, ARG91C, ARG91D, ARG99C, ARG99D, ASN101C, ASN101D, ASN154C, ASN154D, ASP142C, ASP142D, CYS102C, CYS93C, CYS93D, GLN157C, GLN157D, GLN92C, GLN92D, GLN95C, GLN95D, GLY88D, GLY97C, GLY97D, GLY98C, GLY98D, HIS89C, HIS89D, HIS90C, HIS90D, LYS100D, LYS156C, LYS156D, LYS159C, LYS159D, LYS96C, LYS96D, PHE155D, TRP85C, TRP85D, TRP94C, TRP94D, VAL141C