2IFF

structure of an antibody-lysozyme complex: effect of a conservative mutation

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: H-Y
  • Int. Res.: 55
  • Norm. En. per Res.: -3.2989
• Hub Node: L(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
L-H	-65.3109	-56.0761	-407.029	-528.416	184	13	6	16613	4	20	14
L-Y	-6.6948	-5.4074	-103.542	-115.6442	41	6	0	3727	0	5	8
H-Y	-28.4814	-27.0214	-125.937	-181.4398	55	2	0	4728	2	9	10

Interface residues

• L-H: ALA128H, ALA128L, ALA132H, ALA133H, ALA171H, ALA54L, ARG191H, ARG209L, ARG40H, ARG45L, ARG63H, ARG92L, ASN100H, ASN135L, ASN136H, ASN136L, ASN159L, ASN59H, ASN93L, ASP102H, ASP104H, ASP163L, ASP165L, ASP1L, ASP49L, CYS132L, CYS143H, CYS87L, CYS96H, GLN108H, GLN122L, GLN134H, GLN174H, GLN36L, GLN37L, GLN39H, GLN6H, GLN88L, GLN89L, GLU121L, GLU35H, GLU46H, GLU50H, GLU62H, GLY105H, GLY107H, GLY109H, GLY126L, GLY127L, GLY130H, GLY142H, GLY156L, GLY165H, GLY40L, GLY42H, GLY44H, GLY49H, GLY91L, GLY97L, GLY98L, GLY99H, GLY99L, HIS167H, HIS43H, HIS61H, HIS98H, ILE115L, ILE203L, ILE213H, ILE2L, ILE48H, LEU123L, LEU127H, LEU134L, LEU141H, LEU144H, LEU158L, LEU173H, LEU177H, LEU177L, LEU179L, LEU180H, LEU45H, LEU53L, LEU97H, LYS146H, LYS167L, LYS205L, LYS211H, LYS212H, LYS38H, LYS38L, LYS44L, LYS52L, LYS65H, MET138H, MET173L, PHE103H, PHE116L, PHE133L, PHE137L, PHE169H, PHE207L, PHE64H, PHE96L, PRO117L, PRO118L, PRO126H, PRO129H, PRO170H, PRO41H, PRO43L, PRO94L, SER114L, SER119L, SER120L, SER123H, SER125L, SER129L, SER131H, SER160L, SER163H, SER164H, SER172L, SER174L, SER175H, SER175L, SER181H, SER182H, SER183H, SER206L, SER39L, SER42L, SER55L, THR112L, THR124L, THR135H, THR140H, THR162L, THR168H, THR170L, THR176L, THR178L, THR179H, THR185H, THR41L, THR84L, THR95L, TRP106H, TRP157H, TRP161L, TRP33H, TRP36H, TRP46L, TRP47H, TRP90L, TYR101H, TYR125H, TYR171L, TYR178H, TYR31L, TYR33L, TYR35L, TYR48L, TYR60H, TYR85L, TYR86L, TYR95H, VAL113L, VAL124H, VAL130L, VAL131L, VAL139H, VAL145H, VAL157L, VAL166H, VAL172H, VAL184H, VAL209H, VAL214H, VAL37H, VAL3L, VAL57L, VAL93H
• L-Y: ARG45L, ARG45Y, ARG61Y, ARG92L, ASN30L, ASN44Y, ASN46Y, ASN59Y, ASN93L, ASP1L, ASP48Y, ASP49L, ASP52Y, ASP66Y, GLN88L, GLN89L, GLY49Y, GLY67Y, GLY71Y, GLY91L, ILE2L, LYS52L, LYS68Y, MET32L, PRO70Y, PRO94L, SER27L, SER28L, SER50Y, SER72Y, THR47Y, THR50L, THR51Y, THR69Y, THR95L, TRP90L, TYR31L, TYR33L, TYR48L, VAL109Y, VAL29L
• H-Y: ALA42Y, ALA82Y, ARG45Y, ASN100H, ASN39Y, ASN44Y, ASN46Y, ASN59H, ASN65Y, ASP102H, ASP31H, ASP52Y, ASP66Y, CYS80Y, GLN41Y, GLU35H, GLU50H, GLY49H, GLY54H, GLY54Y, GLY56H, GLY67Y, GLY71Y, GLY99H, HIS61H, HIS98H, ILE34H, ILE51H, LEU52H, LEU83Y, LEU84Y, LYS68Y, PHE103H, PRO70Y, PRO79Y, SER30H, SER50Y, SER55H, SER57H, SER72Y, SER81Y, SER85Y, SER86Y, THR40Y, THR43Y, THR51Y, THR58H, THR69Y, TRP33H, TRP36H, TRP47H, TYR101H, TYR32H, TYR53Y, TYR60H