2I9F

structure of the equine arterivirus nucleocapsid protein

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 107
  • Norm. En. per Res.: -6.0727
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-157.1773	14.9891	-507.593	-649.7813	107	36	20	18757	0	7	24
A-C	0.0	7.6791	-46.6955	-39.0164	34	2	0	2298	0	0	3
A-D	-27.2458	3.1294	-85.7952	-109.9117	39	4	0	3178	0	9	15
B-C	-47.8626	-2.3837	-82.4442	-132.6905	39	5	0	3123	0	9	12
B-D	0.0	0.0	-0.4352	-0.4352	16	0	0	72	0	0	8
C-D	-157.7799	22.4101	-485.655	-621.0248	103	31	19	18185	0	7	19

Interface residues

• A-B: ALA105A, ALA105B, ALA64A, ALA64B, ALA83A, ALA83B, ALA85A, ALA85B, ARG55A, ARG55B, ARG63A, ARG63B, ARG72A, ARG72B, ASN59A, ASN59B, ASN69A, ASN69B, ASP53A, ASP53B, ASP57A, ASP57B, ASP84A, ASP84B, GLN101A, GLN101B, GLN60A, GLN60B, GLN71A, GLN71B, GLU50A, GLU50B, GLU62A, GLU62B, GLY52A, GLY52B, GLY77A, GLY77B, GLY79A, GLY79B, GLY86A, GLY86B, GLY87A, GLY87B, HIS56A, HIS56B, HIS6A, HIS78A, HIS78B, HIS7A, HIS7B, HIS8A, HIS8B, ILE100A, ILE100B, ILE76A, ILE76B, LEU54A, LEU54B, LEU58A, LEU58B, LEU66A, LEU66B, LEU81A, LEU81B, LEU88A, LEU88B, LYS103A, LYS103B, PHE73A, PHE73B, PHE74A, PHE74B, PRO51A, PRO51B, PRO96A, PRO96B, SER67A, SER67B, SER68A, SER68B, SER80A, SER80B, SER93A, SER93B, THR65A, THR65B, THR82A, THR82B, THR89A, THR89B, THR91A, THR91B, THR97A, THR97B, TRP94A, TRP94B, TYR90A, TYR90B, VAL104A, VAL104B, VAL70A, VAL70B, VAL92A, VAL92B, VAL95A, VAL95B
• A-C: ARG72A, ARG72C, ASN69A, GLN101A, GLN101C, GLY77A, GLY77C, GLY79A, GLY79C, HIS78A, HIS78C, ILE76A, ILE76C, LEU81A, LEU81C, PHE73A, PHE73C, PRO96A, SER80A, SER80C, SER93A, SER93C, THR82A, THR82C, THR91A, THR91C, TRP94A, TRP94C, TYR90A, TYR90C, VAL92A, VAL92C, VAL95A, VAL95C
• A-D: ALA85D, ARG102A, ARG55D, ARG72A, ASN69A, ASP53D, ASP57D, ASP84D, GLN101A, GLN99A, GLU50D, GLY52D, GLY79A, GLY86D, GLY87D, HIS56D, HIS6D, HIS78A, HIS7D, HIS8D, ILE100A, ILE76A, LEU54D, LEU66A, LEU81A, LEU88D, LYS98A, PHE73A, PRO51D, PRO96A, SER80A, SER93A, THR65A, THR82A, THR91A, THR97A, TRP94A, VAL92A, VAL95A
• B-C: ALA85B, ALA85C, ARG102C, ARG55B, ARG72C, ASN69C, ASP53B, ASP57B, ASP84B, GLN101C, GLN99C, GLU50B, GLY52B, GLY79C, GLY86B, GLY86C, GLY87B, HIS56B, HIS78C, HIS7B, HIS8B, ILE100C, ILE76C, LEU54B, LEU66C, LEU81C, LEU88B, LYS98C, PHE73C, PRO51B, PRO96C, SER80C, THR65C, THR82C, THR89C, THR91C, THR97C, TRP94C, VAL95C
• B-D: ALA85B, ALA85D, ASP53B, ASP53D, GLY86B, GLY86D, GLY87B, GLY87D, HIS6D, HIS7B, HIS7D, HIS8B, HIS8D, LEU88B, LEU88D, THR89B
• C-D: ALA105C, ALA105D, ALA64C, ALA64D, ALA83C, ALA83D, ALA85C, ALA85D, ARG55C, ARG55D, ARG63C, ARG63D, ARG72C, ARG72D, ASN59C, ASN59D, ASN69C, ASN69D, ASP53C, ASP53D, ASP57C, ASP57D, ASP84C, ASP84D, GLN101C, GLN101D, GLN60D, GLN71C, GLN71D, GLU50D, GLU62C, GLU62D, GLY52C, GLY52D, GLY77C, GLY77D, GLY79C, GLY79D, GLY86C, GLY86D, GLY87C, GLY87D, HIS56C, HIS56D, HIS6D, HIS78C, HIS78D, HIS7D, HIS8D, ILE100C, ILE100D, ILE76C, ILE76D, LEU54C, LEU54D, LEU58C, LEU58D, LEU66C, LEU66D, LEU81C, LEU81D, LEU88C, LEU88D, LYS103C, LYS103D, PHE73C, PHE73D, PHE74C, PHE74D, PRO51C, PRO51D, PRO96C, PRO96D, SER67C, SER67D, SER68C, SER68D, SER80C, SER80D, SER93C, SER93D, THR65C, THR65D, THR82C, THR82D, THR89C, THR89D, THR91C, THR91D, THR97C, THR97D, TRP94C, TRP94D, TYR90C, TYR90D, VAL104C, VAL104D, VAL70C, VAL70D, VAL92C, VAL92D, VAL95C, VAL95D