2GRB
crystal structure of an rna quadruplex containing inosine- tetrad
Total interactions analyzed 28
Total true interactions 12
Strongest Interaction Chains B-C
Int. Res. 2
Norm. En. per Res. -10.747
Hub Node A(3)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B 0.0 0.0 -0.363 -0.363 2 0 0 32 0 0 0
A-C -11.9762 0.0 -7.9566 -19.9328 2 1 0 170 0 0 0
A-D -12.1954 0.0 -8.2111 -20.4065 2 1 0 175 0 0 0
B-C -13.6596 0.0 -7.8345 -21.4941 2 1 0 164 0 0 0
B-D -10.9266 0.0 -7.5531 -18.4797 2 1 0 166 0 0 0
C-D 0.0 0.0 -0.3136 -0.3136 2 0 0 29 0 0 0
E-F 0.0 0.0 -0.3938 -0.3938 2 0 0 34 0 0 0
E-G -11.2478 0.0 -8.2247 -19.4725 2 1 0 173 0 0 0
E-H -11.9128 0.0 -7.5147 -19.4275 2 1 0 163 0 0 0
F-G -12.5991 0.0 -7.7532 -20.3523 2 1 0 163 0 0 0
F-H -11.5952 0.0 -8.0865 -19.6817 2 1 0 169 0 0 0
G-H 0.0 0.0 -0.2906 -0.2906 2 0 0 27 0 0 0