2GL8

human retinoic acid receptor rxr-gamma ligand-binding domain

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 98
  • Norm. En. per Res.: -3.7748
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-19.7072	-131.1556	-219.063	-369.9258	98	7	8	10633	10	48	41
A-C	0.0	0.0	-44.6211	-44.6211	55	3	0	2720	0	9	12
B-C	0.0	0.0	-0.0003	-0.0003	2	0	0	1	0	4	3
B-D	-18.5094	0.0	-64.3056	-82.815	66	4	2	3215	0	6	11
C-D	-21.8958	-124.7433	-224.137	-370.7761	103	5	8	10377	12	48	39

Interface residues

• A-B: ALA159A, ALA159B, ALA177A, ALA177B, ALA195A, ALA195B, ALA203A, ALA203B, ARG127A, ARG127B, ARG172A, ARG172B, ARG193A, ARG193B, ARG200A, ARG200B, ARG205A, ARG205B, ASN156A, ASN156B, ASP126B, ASP158A, ASP158B, GLU131A, GLU131B, GLU169A, GLU169B, GLU173A, GLU173B, GLU180A, GLU180B, GLU213B, GLU86A, GLU86B, GLY192A, GLY192B, GLY208A, GLY208B, ILE152A, ILE152B, ILE207A, ILE207B, LEU132A, LEU132B, LEU149A, LEU149B, LEU179A, LEU179B, LEU197A, LEU197B, LEU198A, LEU198B, LEU199A, LEU199B, LEU201A, LEU201B, LEU204A, LEU204B, LEU209A, LEU209B, LEU212A, LEU212B, LYS135A, LYS135B, LYS160A, LYS160B, LYS184A, LYS184B, LYS196A, LYS196B, LYS210A, LYS210B, PHE155A, PHE155B, PHE194A, PHE194B, PRO157A, PRO157B, PRO165A, PRO165B, PRO191A, PRO191B, PRO202A, PRO202B, SER123B, SER166A, SER166B, SER206A, SER206B, THR130A, THR130B, THR170A, TYR176A, TYR176B, VAL153A, VAL153B, VAL175A, VAL175B
• A-C: ALA119C, ALA50C, ALA51C, ALA62A, ARG81A, ARG81C, ASP223A, ASP223C, ASP227C, ASP52A, CYS211C, GLN76A, GLN76C, GLU213A, GLU213C, GLU60A, GLU60C, GLU74A, GLY120A, GLY120C, GLY222A, GLY222C, HIS214A, HIS214C, ILE221A, ILE221C, ILE226C, ILE78A, LEU212A, LEU212C, LEU220A, LEU220C, LEU55C, LEU58C, LEU73A, LEU73C, LEU80A, LEU80C, LYS160A, LYS160C, LYS219C, LYS63A, LYS63C, PHE218C, PHE56C, PHE68A, PRO225C, SER118C, SER69A, THR224A, THR224C, VAL59A, VAL59C, VAL77A, VAL77C
• B-C: HIS214B, HIS214C
• B-D: ALA119B, ALA119D, ALA23B, ALA50B, ALA51B, ALA51D, ALA62D, ARG64B, ARG81B, ARG81D, ASP223B, ASP223D, ASP227D, CYS211B, GLN76B, GLN76D, GLU213B, GLU213D, GLU60B, GLU60D, GLU74D, GLY120B, GLY222B, GLY222D, HIS214B, HIS214D, ILE221B, ILE221D, ILE226B, ILE226D, LEU212B, LEU212D, LEU220B, LEU220D, LEU55B, LEU55D, LEU58D, LEU73B, LEU73D, LEU80B, LEU80D, LYS160D, LYS219B, LYS219D, LYS63B, LYS63D, PHE217B, PHE218B, PHE56B, PHE56D, PHE68B, PHE68D, PRO225B, PRO225D, SER118B, SER69B, SER69D, THR224B, THR224D, THR228D, TRP84B, TRP84D, VAL59B, VAL59D, VAL77B, VAL77D
• C-D: ALA159C, ALA159D, ALA177C, ALA177D, ALA195C, ALA195D, ALA203C, ALA203D, ARG127C, ARG127D, ARG172C, ARG172D, ARG193C, ARG193D, ARG200C, ARG200D, ARG205C, ARG205D, ASN156C, ASN156D, ASP126D, ASP138D, ASP158C, ASP158D, GLU131C, GLU131D, GLU169C, GLU169D, GLU173C, GLU173D, GLU180C, GLU180D, GLU213C, GLU86C, GLU86D, GLY192C, GLY192D, GLY208D, ILE152C, ILE152D, ILE207C, ILE207D, LEU132C, LEU132D, LEU149C, LEU149D, LEU162C, LEU162D, LEU179C, LEU179D, LEU197C, LEU197D, LEU198C, LEU198D, LEU199C, LEU199D, LEU201C, LEU201D, LEU204C, LEU204D, LEU209C, LEU209D, LEU212C, LEU212D, LYS135C, LYS135D, LYS160C, LYS160D, LYS184C, LYS184D, LYS196C, LYS196D, LYS210C, LYS210D, MET139D, PHE155C, PHE155D, PHE194C, PHE194D, PRO157C, PRO157D, PRO165C, PRO165D, PRO191C, PRO191D, PRO202C, PRO202D, SER123D, SER134C, SER134D, SER166C, SER166D, SER206C, SER206D, THR130C, THR130D, THR170D, TYR176C, TYR176D, VAL153C, VAL153D, VAL175C, VAL175D