2GC4
structural comparison of the oxidized ternary electron transfer complex of methylamine dehydrogenase, amicyanin and cytochrome c551i from paracoccus denitrificans with the substrate-reduced, copper free complex at 1.9 a resolution.
Total interactions analyzed 120
Total true interactions 31
Strongest Interaction Chains I-J
Int. Res. 146
Norm. En. per Res. -4.9416
Hub Node A(6)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -136.988 -86.5692 -494.686 -718.2432 148 23 11 18542 13 57 47
A-C -11.0274 -42.8363 -64.9966 -118.8603 32 0 0 2527 4 11 8
A-D 0.0 0.0 -0.058 -0.058 4 0 0 6 0 1 4
A-E -39.3808 -87.9266 -146.848 -274.1554 82 4 7 6328 10 30 23
A-F -98.3549 -22.0148 -401.017 -521.3867 135 18 7 15863 4 30 22
A-G 0.0 -7.6212 -2.5339 -10.155 6 0 0 209 0 5 1
B-C 0.0 -7.9399 -96.3485 -104.2884 60 2 3 5023 1 14 12
B-D 0.0 0.0 -0.0006 -0.0006 2 0 0 2 0 0 0
B-E -108.272 -17.9433 -402.167 -528.3823 137 19 6 15934 4 30 23
C-D -30.5257 13.4127 -113.309 -130.4219 52 6 2 4309 1 19 16
C-E 0.0 -19.1633 -5.7107 -24.874 8 0 0 315 0 6 3
E-F -129.1043 -91.7493 -497.982 -718.8356 147 24 11 18575 13 57 46
E-G -10.8697 -41.4234 -62.588 -114.8811 33 1 0 2488 4 10 8
E-H 0.0 0.0 -0.1169 -0.1169 5 0 0 22 0 1 4
F-G 0.0 -9.4022 -98.931 -108.3332 61 1 3 4988 1 15 13
G-H -29.397 14.9075 -115.32 -129.8095 54 6 1 4450 2 21 16
I-J -133.9601 -86.3083 -501.206 -721.4744 146 25 11 18603 13 57 48
I-K -10.7812 -43.1353 -60.0422 -113.9587 33 2 0 2474 4 10 8
I-L 0.0 0.0 -0.0543 -0.0543 2 0 0 21 0 1 4
I-M -39.08 -88.1342 -145.701 -272.9152 84 3 7 6339 10 30 24
I-N -99.7162 -26.4009 -409.35 -535.4671 136 20 7 16114 4 30 24
I-O 0.0 -11.4957 -4.0178 -15.5135 7 0 0 236 1 7 2
J-K 0.0 -9.3145 -99.2939 -108.6084 62 2 3 5024 1 15 14
J-M -104.4535 -20.4507 -410.221 -535.1251 135 23 7 16019 4 30 24
K-L -33.0988 9.8115 -108.856 -132.1434 57 5 1 4384 3 19 16
K-M 0.0 -7.2793 -2.1762 -9.4556 6 0 0 176 0 7 2
M-N -131.7442 -83.8599 -486.417 -702.0211 145 23 11 18456 13 57 47
M-O -11.2702 -43.3052 -65.3664 -119.9418 32 2 0 2574 4 10 8
M-P 0.0 0.0 -0.3833 -0.3833 6 0 0 72 0 2 6
N-O 0.0 -9.5445 -98.761 -108.3055 59 3 3 4940 1 14 13
O-P -22.6332 19.704 -117.71 -120.6393 51 4 1 4414 1 20 18