2FRX

crystal structure of yebu, a m5c rna methyltransferase from e.coli

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 58
  • Norm. En. per Res.: -2.6872
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-36.5272	-42.3131	-77.0189	-155.8592	58	8	0	3303	3	30	13
A-C	0.0	2.6958	-5.3176	-2.6218	8	0	0	290	0	3	4
B-D	0.0	0.0	-0.2806	-0.2806	2	0	0	42	0	0	1
C-D	-5.4025	-21.7193	-23.1937	-50.3155	42	0	0	1396	0	21	8

Interface residues

• A-B: ALA152B, ALA19A, ALA256A, ARG154B, ARG17A, ARG360B, ARG379B, ASN282A, ASN326B, ASP27A, ASP28A, ASP361B, GLN15A, GLN251A, GLU149B, GLU18A, GLU255A, GLU263A, GLU287A, GLU288A, GLU363B, GLU389B, GLY275A, GLY280A, GLY289A, GLY325B, GLY376B, HIS174B, LEU259A, LEU274A, LEU285A, LYS156B, LYS262A, LYS283A, LYS321B, LYS323B, LYS362B, LYS386B, PHE150B, PHE26A, PHE271A, PHE290A, PHE327B, PHE329B, PHE380B, PRO21A, PRO273A, PRO279A, PRO328B, SER151B, SER153B, SER381B, THR286A, TRP260A, TYR322B, VAL155B, VAL324B, VAL378B
• A-C: ALA31C, ASN212A, ASP208A, ASP27C, ASP28C, LYS211A, PHE26C, TYR7A
• B-D: ARG39D, LYS473B
• C-D: ALA113C, ALA281C, ARG138C, ARG307C, ARG309C, ARG396D, ARG428D, ARG455D, ARG459D, ARG466D, ASN282C, ASN392D, ASN462D, ASP114C, ASP276C, ASP429D, ASP439D, GLU270C, GLU71C, GLU72C, GLY115C, GLY275C, GLY280C, GLY457D, HIS391D, ILE456D, LEU272C, LEU277C, LEU460D, LYS393D, LYS454D, LYS461D, PHE271C, PHE278C, PRO273C, PRO279C, PRO68C, SER458D, THR311C, TRP69C, TYR431D, VAL50C