2FJF
structure of the g6 fab, a phage derived vegf binding fab
Total interactions analyzed 276
Total true interactions 62
Strongest Interaction Chains D-K
Int. Res. 50
Norm. En. per Res. -3.6264
Hub Node B(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
L-H -24.1432 -22.8898 -452.379 -499.412 197 7 14 18573 1 17 14
L-I -7.347 -3.6593 -96.2938 -107.3001 49 6 0 3376 0 4 2
L-J 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 3 1
L-N 0.0 0.0 -1.9365 -1.9365 13 0 0 218 0 0 0
H-I -22.0698 0.0 -142.75 -164.8198 50 4 4 4940 0 0 3
H-J 0.0 0.0 -1.3681 -1.3681 11 0 0 261 0 0 0
H-P -25.0152 0.0 -130.242 -155.2572 81 8 0 5303 0 7 10
H-Q -20.0304 -2.2476 -92.66 -114.938 50 3 0 3392 0 4 2
H-R -20.8482 0.0 -146.264 -167.1122 50 3 4 5125 0 0 3
A-B -13.9862 -15.9904 -424.006 -453.9826 192 10 13 17690 0 16 15
A-F -20.4641 -3.3228 -90.2574 -114.0443 47 8 0 3413 0 4 2
A-U -3.4669 0.0 -8.0041 -11.471 12 0 0 338 0 2 2
A-V 0.0 0.0 -10.2803 -10.2803 10 0 0 366 0 0 0
B-C 0.0 0.0 -5.5047 -5.5047 15 1 0 266 0 0 0
B-F -25.9765 0.0 -139.019 -164.9955 48 5 5 5038 0 0 3
B-K -21.7293 0.0 -133.447 -155.1763 66 6 0 5064 0 3 7
B-M -26.605 -2.4861 -93.2352 -122.3263 48 6 0 3503 0 4 2
B-N -21.2725 0.0 -137.051 -158.3235 51 4 5 4887 0 0 3
C-D -36.3409 -29.2956 -440.896 -506.5325 191 13 14 17833 2 17 16
C-K -23.9971 -2.225 -93.9981 -120.2202 48 6 0 3416 0 4 2
C-U 0.0 0.0 -0.0029 -0.0029 2 0 0 2 0 5 1
D-K -35.4968 0.0 -145.825 -181.3218 50 5 5 5110 0 0 3
D-O -31.6896 -2.6852 -91.1338 -125.5085 47 6 0 3370 0 4 2
D-P -21.0024 0.0 -143.005 -164.0074 50 4 4 5052 0 0 3
D-T -42.2854 0.0 -144.488 -186.7734 81 6 0 5526 0 5 7
D-U 0.0 0.0 -3.6558 -3.6558 20 0 0 593 0 0 0
E-F -12.1922 -21.1164 -427.572 -460.8806 191 9 14 17873 1 17 15
E-G 0.0 0.0 -0.5684 -0.5684 7 0 0 117 0 5 2
E-I -2.1293 0.0 -9.6056 -11.7348 11 1 0 365 0 0 0
E-N -7.3879 -3.9262 -96.3211 -107.6352 49 10 0 3382 0 4 2
F-N -22.1029 0.0 -140.757 -162.8599 50 4 4 5019 0 0 3
F-V -34.177 0.0 -120.568 -154.745 71 7 0 4896 0 3 8
F-W -10.8956 0.0 -8.9654 -19.861 22 2 0 692 0 0 0
G-I -31.2144 -17.4658 -439.829 -488.5092 193 10 14 17704 0 18 15
G-R -8.1149 -3.955 -94.2033 -106.2732 47 5 0 3317 0 4 2
G-W 0.0 0.0 -1.8918 -1.8918 7 0 0 211 0 3 2
G-X 0.0 0.0 -5.4323 -5.4323 20 0 0 452 0 0 0
I-N -27.78 0.0 -124.991 -152.771 76 10 0 5204 0 3 9
I-R -21.6182 0.0 -149.55 -171.1682 50 3 4 5084 0 0 3
J-K -22.7232 -18.9606 -430.562 -472.2458 189 5 14 17559 1 17 15
J-M -3.9282 0.0 -4.6661 -8.5942 14 0 0 354 0 5 3
J-P -10.5454 -3.4561 -95.1052 -109.1067 45 7 0 3517 0 4 2
K-M 0.0 0.0 -6.9103 -6.9103 10 1 0 283 0 0 0
K-P -22.5021 0.0 -146.129 -168.6311 50 3 4 5029 0 0 3
M-N -43.1048 -27.1169 -444.036 -514.2577 197 13 13 18384 2 17 12
O-P -32.6334 -18.5919 -427.766 -478.9914 189 11 13 17657 1 17 14
O-S 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 2
O-T 0.0 0.0 -0.3154 -0.3154 4 0 0 74 0 0 0
P-Q 0.0 0.0 -0.2032 -0.2032 6 0 0 41 0 0 0
Q-R -32.5164 -24.592 -440.576 -497.6844 198 13 14 18257 1 17 15
Q-S 0.0 0.0 -0.0008 -0.0008 2 0 0 2 0 1 2
R-S 0.0 0.0 -0.1787 -0.1787 6 0 0 57 0 0 0
R-X -64.9787 0.0 -140.704 -205.6827 86 13 0 5722 0 7 10
S-T -11.0616 -25.7096 -444.944 -481.7152 191 10 14 18269 1 15 13
S-X -9.0214 -4.6773 -90.4665 -104.1653 46 7 0 3468 0 4 2
T-U -33.5436 -2.8175 -90.0736 -126.4347 46 3 0 3354 0 4 2
T-V -34.6715 0.0 -142.106 -176.7775 50 5 5 5019 0 0 3
T-X -21.7876 0.0 -141.338 -163.1256 49 4 4 4947 0 0 3
U-V -23.9172 -27.4136 -430.18 -481.5108 188 11 14 17851 2 17 13
V-W -22.2615 -2.6797 -95.939 -120.8802 46 4 0 3424 0 4 2
V-X -19.08 0.0 -127.721 -146.801 50 6 5 4757 0 0 3
W-X -30.6235 -30.395 -419.811 -480.8295 193 13 15 17809 2 18 14