2FBW

avian respiratory complex ii with carboxin bound

• Total interactions analyzed: 28
• Total true interactions: 15
• Strongest Interaction:
  • Chains: O-P
  • Int. Res.: 154
  • Norm. En. per Res.: -4.2054
• Hub Node: B(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-159.212	-36.3541	-687.041	-882.6071	242	30	5	28042	10	89	89
A-C	-3.3834	-13.6645	-20.9017	-37.9497	30	2	0	774	3	10	6
B-C	-89.8791	-60.1621	-487.373	-637.4142	153	18	5	18314	6	26	38
B-D	-40.7321	-45.5322	-153.215	-239.4793	57	12	1	5752	3	14	16
B-P	0.0	0.9059	-3.2675	-2.3616	12	0	0	299	0	1	3
B-Q	0.0	0.0	-2.3416	-2.3416	8	0	0	221	0	1	0
C-D	-35.1414	-45.1123	-297.554	-377.8076	128	17	13	12552	3	11	11
C-O	-16.441	-13.7201	-33.3395	-63.5006	28	1	0	1462	1	3	4
C-P	0.0	0.0	-47.6061	-47.6061	58	2	4	3134	0	0	0
D-O	-16.497	0.0	-5.8758	-22.3729	9	1	0	290	0	0	0
N-O	-157.2893	-36.86	-682.931	-877.0803	239	31	5	27891	10	89	89
N-P	-9.2304	-13.6063	-20.5025	-43.3392	29	2	0	786	3	8	6
O-P	-93.8904	-66.3742	-487.368	-647.6327	154	20	5	18267	7	26	37
O-Q	-35.6139	-44.8488	-143.683	-224.1456	56	12	1	5696	3	14	16
P-Q	-34.8905	-44.8916	-292.477	-372.2591	126	10	13	12393	3	11	11

Interface residues

• A-B: ALA105A, ALA106A, ALA120B, ALA150A, ALA162B, ALA226A, ALA260A, ALA334A, ALA348A, ALA59A, ALA60A, ALA74B, ALA84B, ARG119A, ARG149B, ARG152A, ARG164A, ARG167A, ARG189B, ARG18B, ARG195B, ARG202B, ARG218A, ARG32A, ARG336A, ARG422A, ARG457A, ARG464A, ARG469A, ARG511A, ARG54A, ARG62B, ARG63B, ARG66B, ASN112A, ASN516A, ASN53B, ASN70A, ASP110B, ASP114B, ASP148B, ASP151A, ASP153B, ASP169A, ASP193B, ASP196B, ASP198A, ASP20B, ASP22B, ASP46B, ASP510A, ASP518A, ASP56B, CYS148A, CYS158B, CYS161B, CYS223A, CYS262A, CYS65B, CYS70B, CYS73B, CYS85B, GLN127A, GLN137B, GLN141B, GLN144B, GLN150B, GLN186B, GLN331A, GLN473A, GLN61A, GLU109A, GLU111A, GLU121A, GLU122A, GLU126B, GLU134B, GLU140B, GLU147B, GLU157B, GLU175A, GLU197A, GLU342A, GLU39A, GLU467A, GLU521A, GLU524A, GLU54B, GLU67B, GLY114A, GLY123A, GLY138B, GLY154A, GLY154B, GLY163A, GLY199A, GLY228B, GLY256A, GLY259A, GLY261A, GLY339A, GLY349A, GLY41B, GLY512A, GLY68B, GLY69A, GLY71B, HIS155A, HIS159A, HIS227A, HIS56A, ILE108A, ILE125A, ILE125B, ILE146B, ILE159B, ILE196A, ILE257A, ILE264A, ILE340A, ILE346A, ILE49B, ILE513A, ILE51B, ILE69B, LEU102B, LEU110A, LEU115B, LEU129B, LEU143B, LEU152B, LEU155B, LEU158A, LEU160B, LEU161A, LEU166A, LEU229B, LEU263A, LEU45B, LEU470A, LEU50A, LEU519A, LEU55B, LEU59B, LEU68A, LEU83B, LYS109B, LYS123B, LYS124A, LYS130B, LYS131B, LYS136B, LYS139B, LYS227B, LYS23B, LYS49A, LYS507A, LYS50B, LYS52B, LYS87B, LYS88B, MET115A, MET345A, MET43B, PHE117A, PHE118B, PHE221A, PHE347A, PHE35A, PHE509A, PHE51A, PHE61B, PRO104A, PRO113B, PRO116A, PRO127B, PRO21B, PRO226B, PRO24B, PRO338A, PRO42B, PRO52A, SER116B, SER118A, SER124B, SER135B, SER145B, SER156A, SER165A, SER171A, SER194B, SER222A, SER225A, SER229A, SER466A, SER55A, SER57B, SER64B, SER72B, THR120A, THR153A, THR160A, THR170A, THR224A, THR228A, THR230A, THR335A, THR343A, THR362A, THR465A, THR508A, THR517A, THR522A, THR53A, THR57A, THR58B, THR60B, THR86B, TRP190B, TRP19B, TRP515A, TYR113A, TYR119B, TYR122B, TYR126A, TYR128B, TYR142B, TYR156B, TYR162A, TYR168A, TYR172A, TYR198B, VAL107A, VAL107B, VAL108B, VAL112B, VAL149A, VAL174A, VAL363A, VAL514A, VAL520A, VAL58A
• A-C: ALA2C, ALA45A, ALA5C, ARG11C, ARG21C, ASN16C, ASN43A, ASP169A, ASP198A, GLU197A, GLU8C, ILE196A, LEU166A, LYS15C, PHE12C, PHE173A, PHE19A, SER165A, SER171A, SER38A, THR170A, THR3C, THR44A, THR4C, TRP515A, TYR162A, TYR168A, TYR172A, VAL174A, VAL514A
• B-C: ALA10C, ALA120B, ALA234B, ALA236B, ALA243B, ALA2C, ALA37C, ALA5C, ALA78B, ARG104C, ARG11C, ARG18B, ARG214B, ARG21C, ARG223B, ARG29B, ARG43C, ARG62B, ASN117B, ASN16C, ASN174B, ASN220B, ASN230B, ASN76B, ASN81B, ASP109C, ASP110B, ASP114B, ASP176B, ASP20B, ASP22B, ASP26B, CYS163B, CYS164B, CYS168B, CYS215B, CYS221B, CYS225B, GLN118C, GLN121B, GLN205B, GLU120C, GLU126B, GLU237B, GLU7C, GLU8C, GLY111C, GLY113C, GLY175B, GLY228B, GLY232B, GLY25B, GLY79B, GLY80B, HIS104B, HIS105C, HIS216B, HIS26C, HIS42C, ILE125B, ILE218B, ILE235B, ILE27C, ILE29C, ILE40C, ILE77B, ILE99B, LEU102B, LEU111B, LEU115B, LEU116C, LEU179B, LEU229B, LEU23C, LEU34C, LYS109B, LYS112C, LYS115C, LYS123B, LYS15C, LYS177B, LYS18C, LYS233B, LYS239B, LYS23B, LYS240B, LYS27B, LYS31C, LYS6C, LYS87B, LYS98B, MET105B, MET110C, MET219B, MET30B, MET36C, MET38C, MET75B, MET9C, PHE114C, PHE118B, PHE12C, PRO101B, PRO103B, PRO113B, PRO169B, PRO21B, PRO22C, PRO231B, PRO24B, PRO25C, PRO28B, PRO35C, SER116B, SER117C, SER124B, SER167B, SER170B, SER19C, SER20C, SER211B, SER24C, SER28C, SER33C, SER39C, THR166B, THR17C, THR217B, THR222B, THR224B, THR3C, THR4C, THR82B, TRP108C, TRP13C, TRP172B, TRP173B, TRP19B, TRP32C, TYR100B, TYR106B, TYR119B, TYR122B, TYR171B, TYR178B, TYR17B, TYR30C, VAL107B, VAL107C, VAL108B, VAL112B, VAL119C, VAL183B
• B-D: ALA204B, ALA236B, ALA243B, ALA5D, ALA6D, ARG14D, ARG214B, ASN174B, ASP176B, ASP208B, ASP57D, ASP62D, CYS215B, GLN207B, GLN53D, GLU13D, GLU200B, GLY175B, GLY52D, GLY61D, HIS216B, HIS60D, HIS9D, ILE218B, ILE238B, ILE55D, ILE65D, LEU203B, LEU206B, LEU212B, LEU8D, LYS177B, LYS239B, LYS240B, LYS246B, LYS4D, MET241B, MET242B, PHE210B, PRO169B, PRO209B, SER170B, SER3D, SER7D, THR11D, THR217B, THR244B, THR56D, TRP10D, TRP172B, TRP173B, TYR178B, TYR213B, TYR245B, TYR58D, VAL54D, VAL59D
• B-P: ALA72P, ASP92B, ILE140P, LEU93B, LYS75P, LYS88P, LYS95B, LYS98B, PRO81P, SER94B, THR96B, VAL71P
• B-Q: ALA98Q, ASP92B, ILE103Q, LYS95B, MET99Q, SER102Q, SER94B, TRP101Q
• C-D: ALA138C, ALA139C, ALA15D, ALA18D, ALA40D, ALA48C, ALA59C, ALA60C, ALA72C, ALA77D, ALA87C, ALA90C, ALA96D, ALA98D, ARG14D, ARG43C, ASN87D, ASP109C, ASP57D, ASP90D, CYS84D, CYS94D, GLN53D, GLN66C, GLU13D, GLU65C, GLY102C, GLY111C, GLY136C, GLY44C, GLY46C, GLY47D, GLY50D, GLY52C, GLY52D, GLY82D, GLY92D, HIS105C, HIS42C, HIS46D, HIS48D, HIS69C, HIS98C, ILE103C, ILE103D, ILE137C, ILE140C, ILE40C, ILE55D, ILE78D, ILE84C, ILE93D, LEU100D, LEU106C, LEU19D, LEU20D, LEU21D, LEU24D, LEU39D, LEU43D, LEU49C, LEU51C, LEU51D, LEU55C, LEU61C, LEU62C, LEU63C, LEU72D, LEU75D, LEU77C, LEU79C, LEU83D, LEU91C, LEU95C, LYS75C, LYS88C, LYS95D, MET110C, MET99D, PHE56C, PHE67C, PHE80D, PHE86D, PHE89C, PHE93C, PRO25D, PRO68C, PRO81C, SER102D, SER134C, SER141C, SER17D, SER50C, SER54C, SER57C, SER76C, SER76D, SER78C, SER80C, SER96C, THR11D, THR44D, THR56D, THR79D, THR81D, THR99C, TRP100C, TRP101D, TRP108C, TRP10D, TRP49D, TYR28D, TYR58D, TYR70C, TYR85C, TYR85D, TYR89D, VAL16D, VAL47C, VAL53C, VAL54D, VAL58C, VAL71C, VAL73C, VAL74C, VAL91D, VAL92C, VAL97D
• C-O: ALA139C, ALA72C, ALA78O, ARG223O, ASP90O, ASP92O, GLY79O, HIS69C, ILE140C, ILE84C, LEU77C, LEU79C, LEU93O, LYS13O, LYS75C, LYS88C, LYS95O, LYS98O, PRO68C, PRO81C, SER76C, SER78C, SER80C, SER94O, THR96O, VAL71C, VAL73C, VAL74C
• C-P: ALA135C, ALA135P, ALA138C, ALA139C, ALA139P, ALA37C, ALA37P, ALA82C, ALA82P, GLN121P, GLU120P, GLY123C, GLY136C, GLY136P, ILE128C, ILE128P, ILE140C, ILE140P, ILE29C, ILE29P, LEU127C, LEU127P, LEU129C, LEU129P, LEU131C, LEU131P, LEU132C, LEU132P, LEU34C, LEU34P, LEU83C, LYS31C, LYS31P, LYS88C, PHE89C, PHE93C, PRO35P, PRO81C, PRO81P, SER133C, SER134C, SER28C, SER33C, SER33P, SER80C, THR130C, THR130P, TRP32C, TRP32P, TYR30P, TYR85C, TYR85P, VAL124C, VAL124P, VAL125C, VAL125P, VAL126C, VAL126P
• D-O: ASP90O, ASP92O, ILE103D, LEU100D, LYS95O, MET99D, SER102D, SER94O, TRP101D
• N-O: ALA105N, ALA106N, ALA120O, ALA150N, ALA162O, ALA226N, ALA260N, ALA334N, ALA348N, ALA59N, ALA60N, ALA74O, ALA84O, ARG119N, ARG149O, ARG152N, ARG164N, ARG167N, ARG189O, ARG18O, ARG195O, ARG202O, ARG218N, ARG32N, ARG336N, ARG422N, ARG457N, ARG464N, ARG469N, ARG511N, ARG54N, ARG62O, ARG63O, ARG66O, ASN112N, ASN516N, ASN53O, ASN70N, ASP110O, ASP114O, ASP148O, ASP151N, ASP153O, ASP169N, ASP193O, ASP196O, ASP198N, ASP20O, ASP22O, ASP46O, ASP510N, ASP518N, ASP56O, CYS148N, CYS158O, CYS161O, CYS223N, CYS262N, CYS65O, CYS70O, CYS73O, CYS85O, GLN127N, GLN137O, GLN141O, GLN144O, GLN150O, GLN186O, GLN331N, GLN473N, GLN61N, GLU109N, GLU111N, GLU121N, GLU122N, GLU126O, GLU134O, GLU140O, GLU147O, GLU157O, GLU175N, GLU197N, GLU342N, GLU39N, GLU467N, GLU521N, GLU524N, GLU54O, GLU67O, GLY114N, GLY123N, GLY138O, GLY154N, GLY154O, GLY163N, GLY199N, GLY228O, GLY256N, GLY259N, GLY261N, GLY339N, GLY349N, GLY41O, GLY512N, GLY68O, GLY69N, GLY71O, HIS155N, HIS159N, HIS227N, HIS56N, ILE108N, ILE125N, ILE125O, ILE146O, ILE159O, ILE196N, ILE257N, ILE340N, ILE346N, ILE49O, ILE513N, ILE51O, ILE69O, LEU102O, LEU110N, LEU115O, LEU129O, LEU143O, LEU152O, LEU155O, LEU158N, LEU160O, LEU161N, LEU166N, LEU229O, LEU263N, LEU45O, LEU470N, LEU50N, LEU519N, LEU55O, LEU59O, LEU68N, LEU83O, LYS109O, LYS123O, LYS124N, LYS130O, LYS131O, LYS136O, LYS139O, LYS227O, LYS23O, LYS49N, LYS507N, LYS50O, LYS52O, LYS87O, LYS88O, MET115N, MET345N, MET43O, PHE117N, PHE118O, PHE221N, PHE347N, PHE35N, PHE509N, PHE51N, PHE61O, PRO104N, PRO113O, PRO116N, PRO127O, PRO21O, PRO226O, PRO24O, PRO338N, PRO42O, PRO52N, SER116O, SER118N, SER124O, SER135O, SER145O, SER156N, SER165N, SER194O, SER222N, SER225N, SER229N, SER466N, SER55N, SER57O, SER64O, SER72O, THR120N, THR153N, THR160N, THR170N, THR224N, THR228N, THR230N, THR335N, THR343N, THR362N, THR465N, THR508N, THR517N, THR522N, THR53N, THR57N, THR58O, THR60O, THR86O, TRP190O, TRP19O, TRP515N, TYR113N, TYR119O, TYR122O, TYR126N, TYR128O, TYR142O, TYR156O, TYR162N, TYR168N, TYR172N, TYR198O, VAL107N, VAL108O, VAL112O, VAL149N, VAL174N, VAL363N, VAL514N, VAL520N, VAL58N
• N-P: ALA2P, ALA5P, ARG11P, ARG21P, ASN16P, ASN43N, ASP169N, ASP198N, GLU197N, GLU8P, ILE196N, LEU166N, LYS15P, PHE12P, PHE173N, PHE19N, SER165N, SER171N, SER38N, THR170N, THR3P, THR44N, THR4P, TRP515N, TYR162N, TYR168N, TYR172N, VAL174N, VAL514N
• O-P: ALA10P, ALA120O, ALA234O, ALA236O, ALA243O, ALA2P, ALA37P, ALA5P, ALA78O, ARG104P, ARG11P, ARG18O, ARG214O, ARG21P, ARG223O, ARG29O, ARG43P, ARG62O, ASN117O, ASN16P, ASN174O, ASN220O, ASN230O, ASN76O, ASN81O, ASP109P, ASP110O, ASP114O, ASP176O, ASP20O, ASP22O, ASP26O, CYS163O, CYS164O, CYS168O, CYS215O, CYS221O, CYS225O, GLN118P, GLN121O, GLN205O, GLU120P, GLU126O, GLU237O, GLU7P, GLU8P, GLY111P, GLY113P, GLY175O, GLY228O, GLY232O, GLY25O, GLY79O, GLY80O, HIS104O, HIS105P, HIS216O, HIS26P, HIS42P, ILE125O, ILE218O, ILE235O, ILE27P, ILE29P, ILE40P, ILE77O, ILE99O, LEU102O, LEU111O, LEU115O, LEU116P, LEU179O, LEU229O, LEU23P, LEU34P, LYS109O, LYS112P, LYS115P, LYS123O, LYS15P, LYS177O, LYS18P, LYS233O, LYS239O, LYS23O, LYS240O, LYS27O, LYS31P, LYS6P, LYS87O, LYS95O, LYS98O, MET105O, MET110P, MET219O, MET30O, MET36P, MET38P, MET75O, MET9P, PHE114P, PHE118O, PHE12P, PRO101O, PRO103O, PRO113O, PRO169O, PRO21O, PRO22P, PRO231O, PRO24O, PRO25P, PRO28O, PRO35P, SER116O, SER117P, SER124O, SER167O, SER170O, SER19P, SER20P, SER211O, SER24P, SER28P, SER33P, SER39P, THR166O, THR17P, THR217O, THR222O, THR224O, THR3P, THR4P, THR82O, TRP108P, TRP13P, TRP172O, TRP173O, TRP19O, TRP32P, TYR100O, TYR106O, TYR119O, TYR122O, TYR171O, TYR178O, TYR17O, TYR30P, VAL107O, VAL107P, VAL108O, VAL112O, VAL119P, VAL183O
• O-Q: ALA204O, ALA236O, ALA243O, ALA5Q, ALA6Q, ARG14Q, ARG214O, ASN174O, ASP176O, ASP208O, ASP57Q, ASP62Q, CYS215O, GLN207O, GLN53Q, GLU13Q, GLU200O, GLY175O, GLY52Q, GLY61Q, HIS216O, HIS60Q, HIS9Q, ILE218O, ILE238O, ILE55Q, ILE65Q, LEU203O, LEU206O, LEU212O, LEU8Q, LYS177O, LYS239O, LYS240O, LYS246O, LYS4Q, MET241O, MET242O, PHE210O, PRO169O, PRO209O, SER170O, SER3Q, SER7Q, THR11Q, THR217O, THR244O, THR56Q, TRP10Q, TRP172O, TRP173O, TYR213O, TYR245O, TYR58Q, VAL54Q, VAL59Q
• P-Q: ALA138P, ALA139P, ALA15Q, ALA18Q, ALA40Q, ALA48P, ALA59P, ALA60P, ALA72P, ALA77Q, ALA87P, ALA90P, ALA96Q, ALA98Q, ARG14Q, ARG43P, ASN87Q, ASP109P, ASP57Q, ASP90Q, CYS84Q, GLN53Q, GLN66P, GLU13Q, GLU65P, GLY102P, GLY111P, GLY136P, GLY44P, GLY46P, GLY47Q, GLY50Q, GLY52P, GLY52Q, GLY82Q, GLY92Q, HIS105P, HIS42P, HIS46Q, HIS48Q, HIS69P, HIS98P, ILE103P, ILE103Q, ILE137P, ILE140P, ILE40P, ILE55Q, ILE78Q, ILE84P, ILE93Q, LEU100Q, LEU106P, LEU19Q, LEU20Q, LEU21Q, LEU24Q, LEU39Q, LEU43Q, LEU49P, LEU51P, LEU51Q, LEU55P, LEU61P, LEU62P, LEU63P, LEU72Q, LEU75Q, LEU77P, LEU79P, LEU83Q, LEU91P, LEU95P, LYS75P, LYS88P, LYS95Q, MET110P, MET99Q, PHE56P, PHE67P, PHE80Q, PHE86Q, PHE89P, PHE93P, PRO25Q, PRO68P, PRO81P, SER102Q, SER134P, SER141P, SER17Q, SER50P, SER54P, SER57P, SER76P, SER76Q, SER78P, SER80P, SER96P, THR11Q, THR44Q, THR56Q, THR79Q, THR81Q, THR99P, TRP100P, TRP101Q, TRP108P, TRP10Q, TYR28Q, TYR58Q, TYR70P, TYR85P, TYR85Q, TYR89Q, VAL16Q, VAL47P, VAL53P, VAL54Q, VAL58P, VAL71P, VAL73P, VAL74P, VAL91Q, VAL92P, VAL97Q