2E7S
crystal structure of the yeast sec2p gef domain
Total interactions analyzed 190
Total true interactions 33
Strongest Interaction Chains D-R
Int. Res. 43
Norm. En. per Res. -4.1484
Hub Node C(5)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -40.4054 -109.6155 -426.252 -576.2729 190 53 29 20835 13 94 105
A-E 0.0 0.0 -0.009 -0.009 2 0 0 6 0 0 0
C-D -49.9088 -151.7101 -332.789 -534.4079 180 60 29 19844 12 104 109
C-E 0.0 0.0 -0.0145 -0.0145 2 0 0 8 0 1 0
C-F 0.0 0.0 -0.4072 -0.4072 4 0 0 40 0 0 0
C-Q -19.8294 8.6106 -129.602 -140.8208 60 20 10 6568 3 21 20
C-R 0.0 0.0 -0.0857 -0.0857 6 0 0 24 0 0 2
D-G 0.0 0.0 -1.9652 -1.9652 4 0 0 87 0 0 1
D-Q -14.1158 -1.2214 -83.1046 -98.4418 62 9 3 4082 0 14 14
D-R -22.643 -92.5574 -63.1815 -178.3819 43 9 0 2643 6 15 12
E-F -24.3396 -87.5434 -453.463 -565.346 200 66 31 23335 7 99 104
G-H -22.3519 -107.1204 -388.74 -518.2124 177 77 27 19611 15 85 98
G-I 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 0 0
G-Q -27.1218 -73.8316 -56.3466 -157.3 45 10 1 2773 5 16 14
G-R 0.0 -3.8901 -92.4579 -96.348 59 13 4 4216 0 12 13
H-I 0.0 0.0 -1.0472 -1.0472 3 0 0 62 0 0 0
H-Q 0.0 0.0 -0.072 -0.072 6 0 0 30 0 1 2
H-R -17.1014 -0.7167 -166.645 -184.4631 67 33 11 7667 2 25 25
I-J -47.0156 -150.2702 -276.736 -474.0217 166 72 26 17109 12 82 93
J-M 0.0 0.0 -0.0048 -0.0048 2 0 0 5 0 1 1
J-N 0.0 0.0 -0.2718 -0.2718 7 0 0 60 0 0 1
K-L -35.5471 -125.9725 -442.223 -603.7426 187 71 34 21291 11 92 107
K-O 0.0 0.0 -0.0619 -0.0619 3 0 0 16 0 0 0
M-N -49.6641 -150.1831 -364.785 -564.6322 175 59 30 19388 11 103 109
M-O 0.0 0.0 -0.0088 -0.0088 2 0 0 3 0 0 0
M-P 0.0 0.0 -1.1954 -1.1954 4 0 0 67 0 0 0
N-Q 0.0 0.0 -2.1271 -2.1271 4 0 0 98 0 0 1
O-P -43.5618 -140.6963 -433.503 -617.7611 182 69 34 20733 13 97 102
Q-R -37.6574 -145.4103 -331.701 -514.7687 175 68 27 19601 11 88 102
Q-S 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 0
R-S 0.0 0.0 -1.1413 -1.1413 4 0 0 56 0 0 0
R-T 0.0 0.0 -0.0032 -0.0032 2 0 0 1 0 0 0
S-T -19.2363 -129.055 -312.121 -460.4123 171 49 24 18158 12 88 105