2E2H
rna polymerase ii elongation complex at 5 mm mg2+ with gtp
Total interactions analyzed 78
Total true interactions 22
Strongest Interaction Chains A-B
Int. Res. 783
Norm. En. per Res. -3.8436
Hub Node A(7)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
Download
Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -364.9184 -162.9152 -2481.71 -3009.5435 783 169 52 106123 18 256 241
A-C 0.0 5.112 -76.1361 -71.0241 50 1 0 3099 0 16 18
A-E -74.4165 -70.0686 -565.413 -709.8981 202 28 14 24279 7 78 62
A-F -45.1403 -51.5143 -401.843 -498.4976 159 19 14 18202 3 48 42
A-H -38.1983 -9.1798 -361.366 -408.7441 141 23 10 16366 2 37 41
A-I -40.9039 -53.7335 -317.544 -412.1814 131 11 9 13424 4 53 53
A-K -21.9687 -32.3229 -238.874 -293.1656 92 7 8 9663 1 21 19
B-C -63.8265 -92.2691 -453.134 -609.2296 163 23 4 17320 6 55 59
B-F 0.0 1.1671 -6.791 -5.624 18 0 0 455 0 3 6
B-H 0.0 0.0 -0.8038 -0.8038 3 0 0 57 0 0 0
B-I -15.7044 -75.7212 -273.703 -365.1286 128 18 3 12637 2 46 48
B-J -39.9029 -16.5773 -397.09 -453.5703 139 21 6 17657 3 36 35
B-K 0.0 -8.2088 -77.1902 -85.399 55 4 0 3209 1 15 19
B-L -30.4774 -70.3173 -227.505 -328.2997 104 13 9 10483 9 41 41
C-H 0.0 -9.4847 -23.845 -33.3297 21 0 1 1156 0 8 6
C-J -37.4094 -53.6704 -225.945 -317.0249 113 24 12 12063 4 38 26
C-K -48.8415 -15.9056 -417.414 -482.1611 152 40 14 21045 6 44 41
C-L -38.0743 -43.1209 -140.644 -221.8392 60 7 9 5477 6 23 15
E-F 0.0 -15.5836 -16.9102 -32.4938 21 1 0 984 0 5 5
H-K 0.0 0.0 -17.6035 -17.6035 21 0 0 1333 0 4 3
J-L 0.0 0.0 -4.9667 -4.9667 9 0 0 360 0 1 1
K-L 0.0 6.3009 -1.2641 5.0368 5 0 0 176 0 3 2