2DYR
bovine heart cytochrome c oxidase at the fully oxidized state
Total interactions analyzed 325
Total true interactions 95
Strongest Interaction Chains E-I
Int. Res. 52
Norm. En. per Res. -6.3636
Hub Node A(15)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -126.5883 -80.5898 -940.842 -1148.0201 303 30 35 38881 5 40 41
A-C -89.5599 -82.8692 -747.181 -919.6101 245 14 22 29484 6 17 21
A-D -12.8577 -21.2233 -311.908 -345.989 151 4 14 12574 2 19 22
A-E 0.0 0.0 -0.1131 -0.1131 10 0 0 35 0 2 1
A-F -67.5348 -16.6717 -379.689 -463.8956 105 14 9 14114 0 13 5
A-G -31.8914 2.5291 -84.1738 -113.5361 39 3 1 3396 0 11 3
A-H 0.0 0.0 -21.2673 -21.2673 23 5 0 1016 0 3 0
A-I 0.0 0.0 -19.248 -19.248 17 0 0 607 0 0 4
A-J 0.0 0.0 -44.1995 -44.1995 37 2 3 2233 0 2 1
A-K -10.4922 4.5239 -69.0378 -75.0061 44 1 0 2786 0 2 4
A-L -42.2434 -3.189 -457.51 -502.9424 138 12 12 17122 0 19 15
A-M -78.0687 -26.5033 -304.235 -408.807 98 14 6 11681 3 10 6
A-P 0.0 0.0 -0.0397 -0.0397 5 0 0 23 0 0 1
A-S 0.0 0.0 -0.001 -0.001 2 0 0 3 0 0 0
A-T 0.0 0.0 -157.453 -157.453 73 11 7 6985 0 2 1
B-C 0.0 0.0 -1.2164 -1.2164 7 0 0 105 0 1 2
B-D -35.6325 -4.5251 -203.39 -243.5476 82 8 3 8164 3 20 18
B-E -23.6673 -9.8613 -62.631 -96.1596 30 1 0 2632 0 8 9
B-F 0.0 0.0 -0.0633 -0.0633 5 0 0 29 0 0 2
B-H -56.01 -12.7726 -286.146 -354.9286 85 9 2 10557 0 13 8
B-I -73.703 -26.1319 -406.222 -506.0569 142 13 10 15000 2 30 37
B-K 0.0 0.0 -33.7776 -33.7776 22 1 0 1440 0 5 3
B-T 0.0 0.0 -2.0673 -2.0673 16 0 0 315 0 0 1
C-F -29.0201 -29.326 -254.677 -313.0232 81 7 7 9415 2 27 10
C-G -59.9861 -44.8594 -440.929 -545.7745 153 13 9 16933 2 30 18
C-H -3.5189 -7.199 -57.1224 -67.8403 30 1 0 2269 0 4 3
C-J -31.7812 -48.6652 -375.146 -455.5924 119 9 6 15077 4 17 23
C-L 0.0 0.0 -1.8053 -1.8053 4 0 0 82 0 0 1
C-N 0.0 0.0 -0.0527 -0.0527 5 0 0 28 0 0 1
C-S 0.0 0.0 -0.0015 -0.0015 2 0 0 1 0 4 4
C-T 0.0 0.0 -10.3239 -10.3239 17 0 0 702 0 0 2
D-E -88.8142 -31.6331 -442.342 -562.7892 109 17 12 16048 5 46 46
D-F -13.6377 0.0 -33.3251 -46.9628 18 1 0 1175 0 6 1
D-I -18.5682 -26.2511 -96.9102 -141.7295 48 3 3 3754 2 13 13
D-K -33.937 -32.9406 -449.129 -516.0067 111 13 8 16415 1 23 23
D-L 0.0 0.0 -0.1205 -0.1205 6 0 0 31 0 1 1
D-M 0.0 0.6546 -60.9522 -60.2976 49 3 4 2623 0 5 4
E-F -5.9997 -16.8411 -42.1127 -64.9535 23 0 0 1417 1 7 7
E-I -56.8912 -100.3405 -173.676 -330.9077 52 9 1 5988 7 20 13
E-K 0.0 0.0 -0.0016 -0.0016 2 0 0 1 0 0 0
F-G 0.0 0.0 -6.8015 -6.8015 5 0 0 330 0 0 0
F-J -6.4471 0.0 -34.1015 -40.5486 21 0 0 1059 0 3 3
F-N 0.0 0.0 -0.0006 -0.0006 2 0 0 2 0 0 0
F-S 0.0 0.0 -15.5039 -15.5039 10 1 0 474 0 0 0
F-T 0.0 -17.0131 -5.6132 -22.6264 6 0 0 254 1 4 0
G-H -6.4234 -8.0986 -54.2363 -68.7582 18 1 0 1936 2 6 6
G-N 0.0 0.0 -157.623 -157.623 71 9 7 7182 0 2 1
G-O 0.0 0.0 -2.1014 -2.1014 17 0 0 307 0 0 1
G-P 0.0 0.0 -11.6768 -11.6768 17 0 0 739 0 0 2
G-S 0.0 -17.0067 -6.2481 -23.2549 6 0 0 264 0 4 1
H-U -8.5907 2.3116 -71.433 -77.712 49 4 2 3969 0 18 16
I-K -5.5002 0.0 -24.7876 -30.2878 12 1 0 752 0 2 3
J-L -12.3946 2.1468 -31.1062 -41.3539 15 2 0 1224 0 0 4
K-M 0.0 0.0 -0.358 -0.358 4 0 0 61 0 0 0
L-M -33.443 -10.7987 -173.64 -217.8817 68 8 10 7180 1 4 12
N-O -117.1619 -78.2662 -937.62 -1133.0481 301 30 35 38977 6 40 41
N-P -92.1388 -86.4677 -738.865 -917.4715 246 16 23 29368 6 17 21
N-Q -16.8375 -33.9678 -316.739 -367.5443 151 9 14 12589 4 19 23
N-R 0.0 0.0 -0.0942 -0.0942 9 0 0 26 0 2 1
N-S -75.7013 -15.2236 -376.469 -467.3939 104 13 10 14076 0 13 5
N-T -21.3276 2.2424 -86.0034 -105.0886 37 2 0 3366 0 11 3
N-U 0.0 0.0 -25.7968 -25.7968 24 2 0 1030 0 3 0
N-V 0.0 0.0 -18.6522 -18.6522 17 0 0 597 0 0 4
N-W 0.0 0.0 -42.874 -42.874 37 3 3 2247 0 2 1
N-X -8.6387 3.465 -67.5262 -72.6999 45 1 0 2767 0 2 4
N-Y -36.4328 -8.9012 -457.354 -502.688 140 10 11 17265 0 19 15
N-Z -71.8301 -17.6198 -299.977 -389.4269 94 14 5 11658 2 10 6
O-P 0.0 0.0 -1.0886 -1.0886 7 0 0 102 0 1 2
O-Q -43.3083 -6.2758 -208.736 -258.3201 83 12 3 8314 3 20 18
O-R -16.9041 -10.2935 -62.4591 -89.6567 29 1 0 2629 0 8 9
O-S 0.0 0.0 -0.0557 -0.0557 4 0 0 22 0 0 2
O-U -59.9162 -14.5241 -281.98 -356.4203 88 15 2 10678 0 13 8
O-V -53.0364 -25.3274 -395.163 -473.5268 139 13 10 14834 2 30 40
O-X 0.0 0.0 -33.7858 -33.7858 22 1 0 1425 0 5 3
P-S -28.9689 -28.6242 -249.318 -306.9111 82 6 7 9359 2 27 10
P-T -53.8154 -43.4352 -439.954 -537.2046 153 11 9 16951 2 30 18
P-U 0.0 -7.8135 -57.6207 -65.4342 30 1 0 2293 0 4 3
P-W -36.6409 -48.9855 -374.276 -459.9024 120 10 6 15093 4 17 23
P-Y 0.0 0.0 -1.7563 -1.7563 3 0 0 77 0 0 1
Q-R -76.5072 -33.6292 -446.913 -557.0495 109 20 13 16162 6 45 44
Q-S -12.4059 0.0 -33.97 -46.3759 18 1 0 1183 0 6 1
Q-V -19.2925 -25.0141 -102.003 -146.3095 48 2 3 3822 2 13 14
Q-X -25.5986 -27.3295 -448.589 -501.5171 111 11 8 16420 1 23 24
Q-Y 0.0 0.0 -0.1576 -0.1576 7 0 0 33 0 1 1
Q-Z 0.0 0.8657 -58.9183 -58.0526 48 2 4 2653 0 5 4
R-S -6.3866 -17.9794 -43.4887 -67.8547 23 0 0 1459 1 7 7
R-V -81.416 -58.195 -169.414 -309.0251 53 11 1 5974 5 20 12
R-X 0.0 0.0 -0.0016 -0.0016 2 0 0 1 0 0 0
S-T 0.0 0.0 -7.1389 -7.1389 5 0 0 333 0 0 0
S-W -5.403 0.0 -32.888 -38.291 21 1 0 1035 0 3 3
T-U -12.9561 -9.8201 -59.9161 -82.6923 19 1 0 1980 2 6 6
V-X -4.7677 0.0 -19.2142 -23.9819 12 3 0 763 0 2 3
W-Y -12.8052 2.1992 -31.2161 -41.8221 15 1 0 1235 0 0 4
X-Z 0.0 0.0 -0.2477 -0.2477 4 0 0 44 0 0 0
Y-Z -32.2906 -10.1902 -169.395 -211.8758 68 3 10 6963 1 4 12