2DWN

crystal structure of the pria protein complexed with oligonucleotides

• Total interactions analyzed: 15
• Total true interactions: 5
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 152
  • Norm. En. per Res.: -5.7672
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-205.3287	-20.2495	-632.738	-858.3163	152	72	41	24424	3	30	27
A-C	-65.1373	-37.5466	-173.151	-275.8349	69	22	4	8195	2	21	16
A-D	0.0	0.0	-0.1481	-0.1481	2	0	0	31	0	0	0
B-C	0.0	12.2713	-41.5137	-29.2424	20	4	0	1567	0	5	5
C-D	-243.3516	-31.5455	-601.712	-876.6092	152	59	45	25276	4	32	29

Interface residues

• A-B: ALA28A, ALA28B, ALA4A, ALA4B, ALA52A, ALA52B, ALA62A, ALA62B, ALA7A, ALA7B, ALA84A, ALA84B, ALA85A, ALA85B, ARG14A, ARG14B, ARG31A, ARG31B, ARG33A, ARG33B, ARG42A, ARG42B, ASP17A, ASP17B, ASP51A, ASP51B, ASP86A, ASP94A, ASP94B, CYS30A, CYS30B, GLU22A, GLU22B, GLU41A, GLU54A, GLU54B, GLU59A, GLU59B, GLY23B, GLY29A, GLY29B, GLY37A, GLY37B, GLY44A, GLY44B, GLY93A, GLY93B, HIS5A, HIS5B, HIS89A, HIS89B, HIS90A, HIS90B, HIS98A, HIS98B, ILE43A, ILE43B, ILE45A, ILE45B, ILE92A, ILE92B, LEU12A, LEU12B, LEU19A, LEU19B, LEU20A, LEU20B, LEU55A, LEU55B, LEU57A, LEU57B, LEU60A, LEU60B, LEU82A, LEU8A, LEU8B, LEU96A, LEU96B, LYS27A, LYS27B, LYS38A, LYS38B, LYS61A, LYS61B, MET1A, MET1B, MET24A, MET24B, PHE16A, PHE16B, PHE36A, PHE36B, PHE73A, PHE97A, PHE97B, PRO11A, PRO11B, PRO13A, PRO13B, PRO21A, PRO21B, PRO2A, PRO2B, PRO35A, PRO35B, PRO56A, PRO56B, PRO91A, PRO91B, PRO9A, PRO9B, SER48A, SER48B, SER50A, SER50B, SER53A, SER53B, THR15A, THR15B, THR25A, THR25B, TRP78A, TRP78B, TYR18A, TYR18B, TYR87A, TYR87B, TYR88A, TYR88B, VAL10A, VAL10B, VAL26A, VAL26B, VAL32A, VAL32B, VAL34A, VAL34B, VAL3A, VAL3B, VAL46A, VAL46B, VAL47A, VAL47B, VAL49A, VAL49B, VAL63A, VAL63B, VAL64A, VAL6A, VAL6B, VAL95A, VAL95B
• A-C: ALA62A, ARG105C, ARG31C, ARG33A, ARG33C, ARG42C, ASN58A, ASP51A, ASP68C, CYS30C, GLN39A, GLU22A, GLU22C, GLU41A, GLU59A, GLU65A, GLU65C, GLU70C, GLY23A, GLY23C, GLY29C, GLY37A, GLY44C, HIS75C, ILE102C, ILE43C, ILE45C, LEU100C, LEU103C, LEU104C, LEU19A, LEU20A, LEU55A, LEU57A, LEU60A, LEU67C, LEU81C, LEU96C, LYS38A, LYS61A, MET24A, MET24C, PHE73C, PHE97C, PRO101C, PRO21A, PRO21C, PRO35A, PRO56A, PRO71C, SER50A, SER69C, SER76C, THR25A, THR25C, THR74C, TRP78C, TYR18A, VAL26A, VAL32C, VAL34A, VAL49A, VAL63A, VAL63C, VAL64A, VAL64C, VAL66C, VAL72C, VAL77C
• A-D: ASN58A, PRO9D
• B-C: ARG105C, ARG33C, ARG42C, ASN58B, GLN39C, GLN40C, GLU41C, GLU59B, LEU100C, LEU103C, LEU104C, LEU55B, LEU57B, LYS38C, MET1B, PRO101C, PRO2B, PRO56B, VAL3B, VAL64C
• C-D: ALA28C, ALA28D, ALA4C, ALA4D, ALA52C, ALA52D, ALA62C, ALA62D, ALA7C, ALA7D, ALA85C, ALA85D, ARG14C, ARG14D, ARG31C, ARG31D, ARG33C, ARG33D, ARG42C, ARG42D, ASN58D, ASP17C, ASP17D, ASP51C, ASP51D, ASP86C, ASP86D, ASP94C, ASP94D, CYS30C, CYS30D, GLN39C, GLN40C, GLU22D, GLU41C, GLU41D, GLU54C, GLU54D, GLU59C, GLU59D, GLY23D, GLY29C, GLY29D, GLY37C, GLY37D, GLY44C, GLY44D, GLY93C, GLY93D, HIS5C, HIS5D, HIS89C, HIS89D, HIS90C, HIS90D, HIS98C, HIS98D, ILE43C, ILE43D, ILE45C, ILE45D, ILE92C, ILE92D, LEU12C, LEU12D, LEU19C, LEU19D, LEU20C, LEU20D, LEU55C, LEU55D, LEU57C, LEU57D, LEU60C, LEU60D, LEU82C, LEU82D, LEU8C, LEU8D, LEU96C, LEU96D, LYS27C, LYS38C, LYS38D, LYS61C, LYS61D, MET1C, MET24D, PHE16C, PHE16D, PHE36C, PHE36D, PHE73D, PHE97C, PHE97D, PRO11C, PRO11D, PRO13C, PRO13D, PRO21C, PRO21D, PRO2C, PRO2D, PRO35C, PRO35D, PRO56C, PRO56D, PRO91C, PRO91D, PRO9C, PRO9D, SER48C, SER48D, SER50C, SER50D, SER53C, SER53D, THR15C, THR15D, THR25D, TRP78C, TRP78D, TYR18C, TYR18D, TYR87C, TYR87D, TYR88C, TYR88D, VAL10C, VAL10D, VAL26C, VAL26D, VAL32C, VAL32D, VAL34C, VAL34D, VAL3C, VAL3D, VAL46C, VAL46D, VAL47C, VAL47D, VAL49C, VAL49D, VAL63C, VAL63D, VAL64C, VAL64D, VAL6C, VAL6D, VAL95C, VAL95D