2DGE

crystal structure of oxidized cytochrome c6a from arabidopsis thaliana

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: B-D
  • Int. Res.: 52
  • Norm. En. per Res.: -1.6176
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	0.9444	-3.9736	-3.0293	16	0	0	444	0	16	29
A-C	-43.8266	74.9176	-111.853	-80.762	53	5	0	4367	2	18	25
A-D	-7.4819	18.0349	-46.3747	-35.8217	38	8	0	2110	1	20	27
B-C	-17.4106	10.1643	-44.2307	-51.477	37	4	0	2046	1	22	29
B-D	-43.086	76.3018	-117.33	-84.1141	52	5	0	4623	1	18	24
C-D	0.0	0.0	-0.355	-0.355	12	0	0	58	0	19	25

Interface residues

• A-B: ASP151A, ASP151B, GLN150A, GLU117A, GLU117B, GLU135A, GLU152A, GLU152B, LYS136A, LYS136B, LYS155A, LYS155B, THR115A, TYR120A, TYR120B, TYR124A
• A-C: ALA158A, ALA158C, ALA165A, ALA165C, ARG77A, ASP114A, ASP166A, ASP166C, ASP74A, ASP74C, GLN164A, GLN164C, GLN167A, GLN167C, GLN71A, GLN71C, GLN76A, GLN76C, GLU116A, GLU116C, GLU117A, GLU117C, GLU118A, GLU118C, GLU152A, GLU152C, GLU159A, GLU159C, ILE119A, ILE119C, ILE75A, ILE75C, LEU156A, LEU156C, LEU73A, LEU73C, LYS155A, LYS155C, LYS162A, LYS162C, PHE160A, PHE160C, PHE163A, PHE163C, PRO170C, THR115A, THR115C, THR72A, THR72C, TYR120A, TYR120C, VAL161A, VAL161C
• A-D: ARG148A, ARG148D, ARG77A, ARG77D, ARG84A, ARG84D, ASP151A, ASP151D, ASP74A, GLN150A, GLN150D, GLN71A, GLN76A, GLU135A, GLU135D, GLU152A, GLU152D, GLU153A, GLU153D, GLY78A, LEU149A, LEU149D, LEU156A, LEU156D, LEU157A, LEU73A, LEU73D, LEU81A, LEU81D, LYS136D, LYS155D, PHE82A, PRO147A, PRO147D, THR80A, THR80D, TYR120D, TYR124D
• B-C: ARG148B, ARG148C, ARG77B, ARG77C, ARG84B, ARG84C, ASP151B, ASP151C, ASP74B, GLN150B, GLN150C, GLN71B, GLN76B, GLU135B, GLU135C, GLU152B, GLU152C, GLU153B, GLU153C, GLY78B, LEU149B, LEU149C, LEU156B, LEU156C, LEU73B, LEU73C, LEU81B, LEU81C, LYS136B, LYS136C, LYS155C, PRO147B, PRO147C, THR80B, THR80C, TYR120C, TYR124C
• B-D: ALA158B, ALA158D, ALA165B, ALA165D, ARG77B, ASP166B, ASP166D, ASP74B, ASP74D, GLN164B, GLN164D, GLN167B, GLN167D, GLN71B, GLN71D, GLN76B, GLN76D, GLU116B, GLU116D, GLU117B, GLU117D, GLU118B, GLU118D, GLU152B, GLU152D, GLU159B, GLU159D, ILE119B, ILE119D, ILE75B, ILE75D, LEU156B, LEU156D, LEU73B, LEU73D, LYS155B, LYS155D, LYS162B, LYS162D, PHE160B, PHE160D, PHE163B, PHE163D, PRO170B, THR115B, THR115D, THR72B, THR72D, TYR120B, TYR120D, VAL161B, VAL161D
• C-D: ASP151C, ASP151D, GLU117C, GLU117D, LYS136C, LYS136D, PHE125C, PHE125D, TYR120C, TYR120D, TYR124C, TYR124D