2DB3

structural basis for rna unwinding by the dead-box protein drosophila vasa

• Total interactions analyzed: 28
• Total true interactions: 2
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 55
  • Norm. En. per Res.: -3.707
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-12.5519	-72.3542	-118.98	-203.8861	55	4	1	4699	4	29	28
B-C	-11.5227	-25.5937	-67.9304	-105.0468	59	4	0	3043	2	19	16

Interface residues

• A-B: ALA502A, ALA506A, ARG318B, ARG359B, ARG367B, ARG385B, ARG478A, ARG500A, ARG523A, ASN362B, ASP392B, ASP503A, ASP522A, CYS369B, GLN525A, GLN527A, GLU313B, GLU315B, GLU363B, GLU391B, GLU511A, GLY317B, GLY368B, GLY501A, GLY521A, HIS312B, HIS370B, HIS520A, ILE365B, ILE388B, ILE482A, LEU314B, LEU316B, LEU347B, LEU505A, LEU524A, LYS348B, LYS474A, LYS499A, LYS512A, PHE358B, PHE382B, PHE387B, PHE504A, PHE508A, SER345B, SER479A, SER507A, THR366B, THR386B, THR389B, THR498A, TYR346B, TYR475A, TYR564A
• B-C: ALA489C, ALA589C, ARG253B, ARG588C, ASN229B, ASN259B, ASN261B, ASN585C, ASN586C, ASP254B, ASP258B, ASP464C, ASP490C, GLN245B, GLN467C, GLN488C, GLN614C, GLU344B, GLU483C, GLU487C, GLY222C, GLY264B, GLY587C, HIS224C, HIS246B, HIS560C, ILE223C, ILE255B, ILE256B, ILE257B, ILE267B, ILE469C, ILE484C, LEU485C, LYS227C, LYS262B, LYS266B, LYS273B, LYS466C, LYS480C, LYS541C, LYS559C, PHE225B, PHE247B, PHE343B, PRO268B, SER226B, SER249B, SER263B, SER463C, SER486C, THR248B, THR468C, THR590C, THR615C, TYR265B, TYR470C, VAL260B, VAL465C