2D6F

crystal structure of glu-trna(gln) amidotransferase in the complex with trna(gln)

• Total interactions analyzed: 15
• Total true interactions: 5
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 171
  • Norm. En. per Res.: -3.957
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-62.5277	-72.9143	-784.514	-919.956	250	70	4	29838	5	72	80
A-C	-140.3353	-80.5628	-455.754	-676.6521	171	46	9	19763	12	95	85
A-D	-45.1897	-40.4503	-136.851	-222.491	65	13	2	6387	1	27	21
B-C	-34.9318	-21.9738	-151.019	-207.9246	68	10	2	6547	0	27	22
B-D	-108.2781	-67.5297	-516.413	-692.2208	175	58	8	20808	14	96	85

Interface residues

• A-B: ALA186B, ALA202A, ALA202B, ALA237A, ALA237B, ALA305A, ALA305B, ALA382A, ALA382B, ALA39A, ALA39B, ALA42A, ALA42B, ALA431A, ALA431B, ARG204A, ARG204B, ARG208A, ARG208B, ARG253A, ARG253B, ARG259A, ARG259B, ARG260A, ARG260B, ARG264A, ARG264B, ARG303A, ARG303B, ARG367A, ARG367B, ARG377A, ARG377B, ARG378A, ARG378B, ARG434A, ARG434B, ASN147A, ASN147B, ASN267A, ASN267B, ASN365A, ASN365B, ASN369A, ASN369B, ASN371A, ASN371B, ASP178A, ASP178B, ASP261A, ASP261B, ASP316A, ASP316B, ASP323B, ASP341A, ASP341B, ASP388A, ASP388B, ASP389A, ASP389B, ASP40A, ASP40B, ASP41A, ASP41B, ASP43B, CYS339A, CYS339B, CYS363A, CYS363B, CYS400A, CYS400B, GLN203A, GLN203B, GLN362A, GLN362B, GLN381A, GLN381B, GLN4A, GLU146A, GLU146B, GLU151A, GLU151B, GLU302A, GLU302B, GLU324A, GLU324B, GLU332A, GLU332B, GLU393A, GLU393B, GLY312A, GLY312B, GLY333A, GLY333B, GLY335A, GLY335B, GLY337A, GLY337B, GLY366A, GLY366B, GLY376A, GLY376B, GLY435A, GLY435B, HIS175A, HIS175B, HIS181A, HIS181B, HIS256A, HIS256B, HIS321A, HIS321B, HIS338A, HIS338B, ILE143A, ILE143B, ILE307A, ILE307B, ILE313A, ILE313B, ILE317A, ILE317B, ILE318A, ILE318B, ILE329B, ILE344A, ILE344B, ILE430A, ILE430B, LEU144A, LEU144B, LEU336A, LEU336B, LEU343A, LEU343B, LEU364A, LEU364B, LEU379A, LEU379B, LEU380A, LEU380B, LEU391A, LYS149A, LYS149B, LYS254A, LYS254B, LYS308A, LYS308B, LYS319A, LYS319B, MET148A, MET148B, MET180A, MET180B, MET239A, MET239B, MET255A, MET255B, MET266A, MET266B, MET359B, MET370A, MET370B, PHE263A, PHE263B, PHE306A, PHE306B, PHE433A, PHE433B, PRO150A, PRO150B, PRO311A, PRO311B, PRO315A, PRO315B, PRO340A, PRO340B, PRO392A, PRO392B, SER145A, SER145B, SER205A, SER205B, SER206A, SER206B, SER258A, SER258B, SER265A, SER265B, SER309A, SER309B, SER314A, SER314B, SER361A, SER361B, SER374A, SER374B, SER429A, SER429B, THR177A, THR177B, THR179A, THR179B, THR183A, THR183B, THR238A, THR238B, THR257A, THR257B, THR262A, THR262B, THR334A, THR334B, THR342A, THR342B, THR360A, THR360B, THR375A, THR375B, THR428A, THR428B, TRP153A, TRP153B, TRP320A, TRP320B, TYR152A, TYR152B, TYR182A, TYR182B, TYR310A, TYR310B, TYR326A, TYR326B, TYR373A, TYR373B, TYR396A, TYR396B, TYR432A, TYR432B, VAL304A, VAL304B, VAL330A, VAL330B, VAL368A, VAL368B, VAL372A, VAL372B, VAL394A, VAL397A, VAL397B
• A-C: ALA103A, ALA112A, ALA125A, ALA137C, ALA213A, ALA39A, ALA42A, ALA64A, ALA83C, ARG109A, ARG109C, ARG118C, ARG124A, ARG132C, ARG204A, ARG208A, ARG259A, ARG260A, ARG38A, ARG419C, ARG430C, ARG43C, ARG440C, ARG45A, ARG46C, ASN126A, ASN126C, ASN153C, ASN44C, ASN53A, ASN56A, ASN73C, ASP107A, ASP112C, ASP131A, ASP139C, ASP169C, ASP207A, ASP212A, ASP240A, ASP241A, ASP261A, ASP28A, ASP37A, ASP40C, ASP41A, ASP425C, ASP433C, ASP434C, ASP43A, ASP44A, ASP63A, ASP84C, CYS155C, GLN120C, GLN131C, GLN203A, GLN218A, GLU113C, GLU128A, GLU152C, GLU157C, GLU184C, GLU423C, GLU432C, GLU52A, GLU60A, GLU61C, GLU85C, GLU86C, GLY111A, GLY128C, GLY129C, GLY134C, GLY54A, GLY58A, HIS115C, HIS236A, HIS256A, HIS39C, HIS46A, HIS68C, HIS70C, HIS75C, HIS89C, ILE105A, ILE106A, ILE122C, ILE217A, ILE41C, ILE426C, ILE431C, ILE47A, ILE57A, ILE61A, LEU122A, LEU123A, LEU129A, LEU135C, LEU154C, LEU156C, LEU215A, LEU242A, LEU36A, LEU422C, LEU428C, LEU436C, LEU45C, LEU49A, LEU51A, LEU67C, LEU80C, LYS119C, LYS26A, LYS50A, MET108C, MET117C, MET239A, MET420C, MET64C, PHE114C, PHE130C, PHE429C, PHE60C, PHE69C, PRO127A, PRO209A, PRO276A, PRO27A, PRO427C, PRO47C, PRO87C, PRO88C, SER104A, SER205A, SER206A, SER210A, SER211A, SER214A, SER243A, SER258A, SER417C, SER418C, SER62A, THR110A, THR116C, THR127C, THR133C, THR138C, THR186C, THR238A, THR257A, THR262A, THR30A, THR424C, THR48C, TYR108A, TYR31A, TYR421C, TYR55A, TYR71C, VAL110C, VAL111C, VAL113A, VAL121C, VAL136C, VAL29A, VAL42C, VAL48A, VAL59A, VAL81C
• A-D: ALA431A, ALA83D, ARG118D, ARG29D, ARG367A, ARG377A, ARG417A, ARG427A, ARG434A, ARG43D, ASN267A, ASN365A, ASN369A, ASN371A, ASN425A, ASN73D, ASP388A, ASP389A, ASP38D, ASP40D, ASP425D, CYS26D, CYS28D, CYS79D, GLU423D, GLU426A, GLU72D, GLU76D, GLU77D, GLU82D, GLU85D, GLU86D, GLY366A, HIS39D, HIS75D, HIS89D, ILE41D, ILE426D, ILE430A, LEU175D, LEU269A, LEU336A, LEU380A, LEU428D, LEU80D, MET370A, PHE433A, PRO27D, PRO427D, PRO87D, PRO88D, PRO90D, SER22D, SER374A, SER429A, THR424D, THR428A, THR78D, TYR373A, TYR432A, TYR71D, TYR74D, VAL368A, VAL372A, VAL81D
• B-C: ALA431B, ALA83C, ARG118C, ARG29C, ARG367B, ARG377B, ARG417B, ARG427B, ARG434B, ARG43C, ASN285B, ASN365B, ASN369B, ASN371B, ASN425B, ASN73C, ASP388B, ASP389B, ASP38C, ASP40C, ASP425C, CYS26C, CYS28C, CYS79C, GLU283B, GLU284B, GLU423C, GLU426B, GLU72C, GLU76C, GLU77C, GLU82C, GLU85C, GLU86C, GLY366B, HIS39C, HIS75C, HIS89C, ILE41C, ILE426C, ILE430B, LEU175C, LEU269B, LEU336B, LEU380B, LEU428C, LEU80C, LYS23C, MET370B, PHE433B, PRO27C, PRO427C, PRO87C, PRO88C, PRO90C, SER22C, SER374B, SER429B, THR424C, THR428B, THR78C, TYR373B, TYR432B, TYR71C, TYR74C, VAL368B, VAL372B, VAL81C
• B-D: ALA112B, ALA125B, ALA137D, ALA213B, ALA39B, ALA42B, ALA64B, ALA83D, ARG109B, ARG109D, ARG118D, ARG124B, ARG132D, ARG204B, ARG208B, ARG259B, ARG260B, ARG38B, ARG419D, ARG430D, ARG43D, ARG440D, ARG45B, ARG46D, ARG57D, ARG6B, ASN126B, ASN126D, ASN153D, ASN44D, ASN53B, ASN56B, ASN73D, ASP107B, ASP112D, ASP120B, ASP131B, ASP139D, ASP169D, ASP207B, ASP212B, ASP240B, ASP241B, ASP261B, ASP28B, ASP37B, ASP40D, ASP41B, ASP425D, ASP433D, ASP43B, ASP44B, ASP63B, ASP84D, CYS155D, GLN120D, GLN131D, GLN203B, GLN218B, GLU113D, GLU128B, GLU152D, GLU157D, GLU184D, GLU423D, GLU432D, GLU52B, GLU60B, GLU61D, GLU85D, GLU86D, GLY111B, GLY128D, GLY129D, GLY134D, GLY54B, GLY58B, HIS115D, HIS236B, HIS256B, HIS39D, HIS46B, HIS68D, HIS70D, HIS75D, HIS89D, ILE105B, ILE106B, ILE122D, ILE217B, ILE41D, ILE426D, ILE431D, ILE47B, ILE57B, ILE61B, LEU122B, LEU123B, LEU129B, LEU130B, LEU135D, LEU154D, LEU156D, LEU215B, LEU242B, LEU36B, LEU422D, LEU428D, LEU436D, LEU45D, LEU49B, LEU51B, LEU67D, LEU80D, LYS119D, LYS26B, LYS50B, MET108D, MET117D, MET239B, MET420D, MET64D, PHE114D, PHE130D, PHE429D, PHE60D, PHE69D, PRO127B, PRO209B, PRO276B, PRO27B, PRO427D, PRO47D, PRO87D, PRO88D, SER104B, SER205B, SER206B, SER210B, SER211B, SER214B, SER243B, SER258B, SER417D, SER418D, SER62B, THR110B, THR116D, THR127D, THR133D, THR138D, THR186D, THR238B, THR257B, THR262B, THR30B, THR424D, THR48D, TYR108B, TYR31B, TYR3B, TYR421D, TYR55B, TYR71D, VAL110D, VAL111D, VAL113B, VAL121D, VAL136D, VAL24B, VAL29B, VAL42D, VAL48B, VAL59B, VAL81D