2D2C
crystal structure of cytochrome b6f complex with dbmib from m. laminosus
Total interactions analyzed 120
Total true interactions 53
Strongest Interaction Chains A-D
Int. Res. 41
Norm. En. per Res. -2.7154
Hub Node A(9)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -15.1464 -25.1005 -541.184 -581.4309 225 112 23 27379 2 20 10
A-C 0.0 -4.8287 -24.4789 -29.3076 32 6 0 1134 0 6 7
A-D 0.0 0.0 -111.33 -111.33 41 20 9 4884 0 1 1
A-E 0.0 0.0 -80.6259 -80.6259 58 32 12 6150 0 0 0
A-F 0.0 0.0 -0.0375 -0.0375 4 0 0 16 0 0 0
A-G 0.0 0.0 -9.792 -9.792 27 4 0 740 0 1 1
A-N 0.0 -5.7771 -232.938 -238.7151 129 27 2 11208 0 13 6
A-O 0.0 0.0 -0.1011 -0.1011 7 0 0 22 0 0 0
A-Q 0.0 0.0 -51.1934 -51.1934 61 5 2 3081 0 7 6
B-C -36.4544 -32.3528 -175.544 -244.3512 107 29 8 9327 4 15 14
B-D 0.0 0.0 -10.9532 -10.9532 22 1 0 693 0 0 0
B-E 0.0 7.7197 -48.301 -40.5813 59 22 3 4291 0 0 3
B-F 0.0 0.0 7.0483 7.0483 18 12 0 1007 0 1 1
B-G -6.2658 0.0 -79.8503 -86.1161 53 10 9 4016 0 3 1
B-N 0.0 0.0 -0.0007 -0.0007 2 0 0 2 0 0 0
B-Q 0.0 13.3547 -42.0964 -28.7417 49 2 1 2684 0 1 3
C-D 0.0 0.0 -42.2039 -42.2039 42 0 5 2877 0 1 5
C-E 0.0 0.0 -0.4451 -0.4451 8 0 0 92 0 0 0
C-F -9.2318 76.2723 -23.6297 43.4108 28 1 0 1020 0 5 8
C-G 0.0 9.3051 -116.89 -107.5849 64 10 4 6323 0 5 9
C-H 0.0 0.0 -16.4279 -16.4279 28 0 2 1515 0 0 1
C-Q 0.0 0.0 -4.6718 -4.6718 21 0 1 565 0 5 5
D-H 0.0 0.0 -0.0025 -0.0025 4 0 0 4 0 0 0
D-N 0.0 0.0 -31.9468 -31.9468 48 1 1 2125 0 7 4
D-O 0.0 7.6304 -39.796 -32.1656 43 7 1 2420 0 1 3
D-P 0.0 0.0 -6.8824 -6.8824 21 0 1 637 0 4 4
E-F 0.0 0.0 -82.9505 -82.9505 37 29 13 4907 0 0 0
E-G 0.0 0.0 -1.013 -1.013 7 0 0 131 0 0 0
F-G 0.0 0.0 -76.8451 -76.8451 42 8 4 4249 0 2 2
F-H 0.0 0.0 -20.3439 -20.3439 28 5 1 1642 0 0 0
G-H 0.0 0.0 -33.6734 -33.6734 38 0 2 2326 0 0 0
N-O -29.1814 -8.2974 -509.537 -547.0158 223 120 20 26811 1 18 12
N-P 0.0 -13.0257 -23.4188 -36.4445 38 13 0 1606 0 7 10
N-Q -2.7583 0.0 -91.5055 -94.2638 36 12 5 3955 0 1 0
N-R 0.0 0.0 -61.8426 -61.8426 52 6 6 4098 0 0 0
N-S 0.0 0.0 -0.7233 -0.7233 5 0 0 80 0 2 0
N-T 0.0 0.0 -12.2673 -12.2673 24 8 0 1005 0 1 1
O-P -32.1986 0.8448 -201.011 -232.3649 102 47 11 10710 2 14 11
O-Q 0.0 0.0 -15.4503 -15.4503 25 3 0 844 0 0 0
O-R 0.0 7.9963 -79.8648 -71.8685 55 23 3 5385 0 0 5
O-S 0.0 0.0 -1.728 -1.728 7 0 0 99 0 0 1
O-T 0.0 0.0 -73.0358 -73.0358 52 22 11 4639 0 2 1
P-Q 0.0 -0.7922 -97.2128 -98.005 46 25 8 5051 0 2 7
P-R 0.0 0.0 -0.3408 -0.3408 7 0 0 73 0 0 0
P-S -5.5561 72.2793 -20.2089 46.5143 27 0 0 990 0 5 8
P-T -15.6402 8.2814 -132.927 -140.2859 65 28 5 7197 0 5 10
P-U 0.0 0.0 -21.2963 -21.2963 31 0 2 1696 0 0 1
Q-U 0.0 0.0 -1.1839 -1.1839 13 0 0 204 0 1 1
R-S 0.0 0.0 -84.5329 -84.5329 39 29 13 4920 0 1 0
R-T 0.0 0.0 -1.0766 -1.0766 7 0 0 133 0 0 0
S-T 0.0 38.215 -84.7817 -46.5667 45 10 4 4576 0 3 3
S-U 0.0 0.0 -15.2355 -15.2355 28 5 1 1649 0 0 0
T-U 0.0 0.0 -34.5005 -34.5005 38 0 3 2340 0 0 0