2CXE

crystal structure of octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) from pyrococcus horikoshii ot3 (form- 2 crystal)

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: B-C
  • Int. Res.: 335
  • Norm. En. per Res.: -2.9447
• Hub Node: B(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-19.1779	31.6831	-69.8952	-57.3899	46	8	0	3084	6	33	30
B-C	-110.4174	-1.3326	-874.739	-986.489	335	128	21	40710	10	57	72
B-D	-18.8376	30.2679	-70.3127	-58.8824	46	7	0	3199	6	33	31
C-D	-87.6308	104.8471	-17.521	-0.3047	63	48	0	5301	10	48	37

Interface residues

• A-B: ARG131B, ARG198A, ARG202A, ARG204A, ARG208A, ARG265B, ARG341B, ASN197A, ASP270B, GLN137B, GLN141B, GLU128B, GLU145B, GLU168A, GLU200A, GLU201A, GLU266B, GLU269B, GLU338B, GLY135B, GLY142B, GLY164A, GLY272B, HIS132B, HIS339B, ILE340B, LEU130B, LEU271B, LEU273B, LYS134B, LYS205A, LYS336B, MET240A, MET304B, PHE133B, PHE138B, PHE146B, PHE194A, PHE196A, PRO136B, PRO195A, SER166A, SER193A, THR268B, TYR127B, VAL167A
• B-C: ALA104B, ALA104C, ALA106B, ALA106C, ALA114B, ALA114C, ALA171B, ALA171C, ALA174B, ALA174C, ALA256B, ALA256C, ALA260B, ALA260C, ALA280B, ALA280C, ALA283B, ALA283C, ALA284B, ALA284C, ALA320B, ALA320C, ALA384B, ALA384C, ALA47B, ALA65B, ALA65C, ARG119B, ARG119C, ARG198B, ARG198C, ARG237B, ARG237C, ARG265B, ARG265C, ARG279B, ARG279C, ARG287B, ARG287C, ARG290B, ARG290C, ARG383B, ARG383C, ARG45B, ARG45C, ARG67B, ARG67C, ASN108B, ASN108C, ASN117B, ASN117C, ASN190B, ASN190C, ASN197B, ASN197C, ASN226B, ASN226C, ASN232B, ASN232C, ASN288B, ASN288C, ASN35B, ASN35C, ASP188B, ASP188C, ASP252B, ASP252C, ASP380B, ASP380C, GLN100B, GLN100C, GLN262B, GLN262C, GLU168B, GLU168C, GLU169B, GLU169C, GLU172B, GLU172C, GLU176B, GLU176C, GLU189B, GLU189C, GLU235B, GLU235C, GLU266B, GLU266C, GLU33B, GLU33C, GLU418B, GLU49B, GLU49C, GLU63B, GLU63C, GLU94B, GLU94C, GLU95B, GLU95C, GLU9B, GLU9C, GLY107B, GLY107C, GLY111B, GLY111C, GLY164B, GLY164C, GLY229B, GLY229C, GLY257B, GLY257C, GLY292B, GLY292C, GLY313B, GLY313C, GLY317B, GLY317C, GLY321B, GLY321C, GLY349B, GLY349C, GLY350B, GLY350C, GLY373B, GLY373C, GLY377B, GLY377C, GLY381B, GLY381C, GLY385C, GLY53B, GLY53C, GLY96B, GLY96C, HIS278B, HIS278C, HIS282B, HIS282C, HIS291B, HIS291C, HIS311B, HIS311C, HIS378B, HIS378C, ILE173B, ILE173C, ILE227C, ILE233B, ILE233C, ILE251B, ILE251C, ILE253B, ILE253C, ILE293B, ILE293C, ILE305B, ILE305C, ILE52B, ILE52C, LEU101B, LEU101C, LEU115B, LEU115C, LEU118B, LEU118C, LEU120B, LEU120C, LEU177B, LEU177C, LEU261B, LEU261C, LEU298B, LEU298C, LEU58B, LEU58C, LEU61B, LEU61C, LEU90B, LEU90C, LEU92B, LEU92C, LEU98B, LEU98C, LYS113B, LYS113C, LYS116B, LYS116C, LYS134B, LYS134C, LYS160B, LYS160C, LYS162B, LYS162C, LYS186B, LYS186C, LYS236B, LYS236C, LYS318B, LYS318C, LYS60B, LYS60C, LYS66B, LYS66C, MET112B, MET112C, MET163B, MET163C, MET234B, MET234C, MET250B, MET250C, MET264B, MET264C, MET281B, MET281C, MET319B, MET319C, MET376B, MET376C, MET64B, MET64C, MET69B, MET69C, PHE102B, PHE102C, PHE110B, PHE110C, PHE133B, PHE133C, PHE14B, PHE14C, PHE191B, PHE191C, PHE194B, PHE194C, PHE196B, PHE196C, PHE199B, PHE199C, PHE285B, PHE285C, PHE93B, PHE93C, PRO159B, PRO159C, PRO161B, PRO161C, PRO195B, PRO195C, PRO230B, PRO230C, PRO289B, PRO289C, PRO379B, PRO379C, PRO382B, PRO382C, PRO62B, PRO62C, PRO89B, PRO89C, SER103B, SER103C, SER166B, SER166C, SER179C, SER193B, SER193C, SER259B, SER259C, SER348B, SER348C, SER48B, SER48C, SER50B, SER50C, SER51B, SER51C, SER68B, SER68C, SER97B, SER97C, THR192B, THR192C, THR228B, THR228C, THR286B, THR286C, THR314B, THR314C, THR54B, THR54C, THR56B, THR56C, THR57B, THR57C, THR91B, THR91C, TRP165B, TRP165C, TRP258B, TRP258C, TRP55B, TRP55C, TRP59B, TRP59C, TYR11B, TYR11C, TYR129B, TYR170B, TYR170C, TYR175B, TYR175C, TYR263B, TYR263C, TYR88B, TYR88C, VAL105B, VAL105C, VAL109B, VAL109C, VAL158B, VAL158C, VAL231B, VAL231C, VAL254B, VAL254C, VAL255B, VAL255C, VAL267B, VAL267C, VAL316C, VAL375B, VAL375C, VAL99B, VAL99C
• B-D: ARG131D, ARG198B, ARG202B, ARG204B, ARG208B, ARG265D, ARG341D, ASN197B, ASP270D, GLN137D, GLN141D, GLU128D, GLU145D, GLU168B, GLU200B, GLU201B, GLU266D, GLU269D, GLU338D, GLY135D, GLY142D, GLY164B, GLY272D, HIS132D, HIS339D, ILE340D, LEU130D, LEU271D, LEU273D, LYS134D, LYS205B, LYS336D, MET240B, MET304D, PHE133D, PHE138D, PHE146D, PHE194B, PHE196B, PRO136D, PRO195B, SER166B, SER193B, THR268D, TYR127D, VAL167B
• C-D: ARG131C, ARG131D, ARG23C, ARG23D, ARG67C, ARG67D, ASP24C, ASP24D, GLN100C, GLN100D, GLU128C, GLU128D, GLU20C, GLU20D, GLU25C, GLU25D, GLU338C, GLU338D, GLU63C, GLU63D, GLU94C, GLU94D, GLU95C, GLU95D, GLY22C, GLY22D, GLY96C, GLY96D, HIS132C, HIS132D, HIS339C, HIS339D, ILE340C, ILE340D, LEU130C, LEU130D, LEU90C, LEU90D, LEU92C, LEU92D, LYS336C, LYS336D, MET64C, MET64D, PHE93C, PHE93D, PRO126C, PRO126D, PRO21C, PRO21D, PRO89C, PRO89D, SER97C, SER97D, THR91C, THR91D, TRP337C, TRP337D, TYR127C, TYR127D, TYR129C, TYR129D, TYR19D