2C38
rnase ph core of the archaeal exosome in complex with a5 rna
Total interactions analyzed 276
Total true interactions 77
Strongest Interaction Chains K-L
Int. Res. 157
Norm. En. per Res. -5.2802
Hub Node A(7)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -148.9978 -116.5302 -537.294 -802.822 158 38 9 21206 9 59 54
A-C 0.0 0.0 -6.3514 -6.3514 8 0 0 255 0 0 2
A-D -70.5973 -56.986 -304.626 -432.2093 118 13 9 13849 4 50 32
A-E 0.0 0.0 -4.5613 -4.5613 8 0 0 241 0 0 2
A-K 0.0 0.0 -0.0051 -0.0051 3 0 0 6 0 1 2
A-L 0.0 -12.3824 -55.5539 -67.9363 48 0 2 3643 0 15 20
A-Q 0.0 0.0 -0.0168 -0.0168 3 0 0 13 0 1 2
B-D 0.0 0.0 -7.068 -7.068 9 0 0 284 0 2 9
B-E -65.2593 -64.5907 -337.56 -467.4099 118 12 9 14260 3 49 31
B-F 0.0 0.0 -6.004 -6.004 8 0 0 253 0 2 9
B-N 0.0 0.0 -0.001 -0.001 4 0 0 3 0 0 4
B-Q 0.0 -13.1443 -84.9419 -98.0862 51 2 2 4431 0 17 20
C-D -150.4122 -116.529 -551.983 -818.9243 156 38 9 21662 8 58 55
C-E 0.0 0.0 -5.6528 -5.6528 8 0 0 255 0 0 2
C-F -62.6643 -67.1041 -311.972 -441.7404 115 15 9 14086 3 48 33
C-G 0.0 0.0 -0.0168 -0.0168 4 0 0 17 0 1 2
C-S 0.0 0.0 -0.021 -0.021 4 0 0 17 0 1 2
C-T -19.7379 -10.7568 -99.4651 -129.9598 53 3 3 4831 0 19 21
D-F 0.0 0.0 -4.44 -4.44 7 0 0 226 0 1 8
D-G -9.2256 -9.6989 -76.641 -95.5655 50 1 3 4296 0 15 21
E-F -152.3947 -118.8867 -558.737 -830.0184 158 31 9 21596 9 58 53
E-M 0.0 0.0 -0.0041 -0.0041 3 0 0 6 0 1 1
E-N -9.3336 -8.112 -87.8863 -105.3319 50 5 2 4603 0 16 20
E-W 0.0 0.0 -0.0094 -0.0094 3 0 0 10 0 1 2
F-T 0.0 0.0 -0.0051 -0.0051 6 0 0 6 0 0 6
F-W 0.0 -17.0897 -73.0246 -90.1143 49 1 2 4123 0 17 20
G-H -132.8284 -119.267 -541.017 -793.1124 158 35 9 21531 10 58 55
G-I 0.0 0.0 -3.146 -3.146 9 3 0 305 0 1 3
G-K 0.0 0.0 -6.7946 -6.7946 8 1 0 281 0 0 2
G-L -60.1368 -57.5696 -321.337 -439.0434 118 16 8 13820 4 47 32
G-S 0.0 0.0 -0.0158 -0.0158 3 0 0 13 0 1 1
H-I -72.3149 -68.4372 -329.128 -469.8801 120 25 9 14054 4 49 33
H-J 0.0 0.0 -7.4878 -7.4878 8 0 0 275 0 2 10
H-L 0.0 0.0 -5.5801 -5.5801 9 0 0 269 0 1 8
H-S -8.129 -15.1163 -93.3341 -116.5794 51 1 2 4687 0 17 21
H-V 0.0 0.0 -0.0014 -0.0014 4 0 0 4 0 0 5
I-J -155.1106 -115.4465 -561.264 -831.8211 161 40 9 21837 8 60 55
I-K 0.0 0.0 -7.1115 -7.1115 8 0 0 287 0 1 2
I-O 0.0 0.0 -0.0065 -0.0065 3 0 0 7 0 1 1
I-U 0.0 0.0 -0.0102 -0.0102 4 0 0 12 0 1 1
I-V -20.0466 -15.5014 -103.191 -138.739 52 7 2 5005 0 17 21
J-K -76.814 -56.5456 -346.876 -480.2356 122 23 9 15028 3 50 34
J-L 0.0 0.0 -2.6122 -2.6122 7 0 0 179 0 1 8
J-O 0.0 -14.2818 -80.4972 -94.779 51 2 2 4305 0 17 21
J-R 0.0 0.0 -0.0033 -0.0033 5 0 0 5 0 0 5
K-L -147.3259 -130.5846 -551.084 -828.9945 157 37 9 21608 9 59 56
K-Q 0.0 0.0 -0.018 -0.018 4 0 0 16 0 1 1
K-R -23.9025 -18.6006 -101.379 -143.8821 52 8 3 4974 0 19 21
M-N -136.56 -120.3789 -528.749 -785.6879 158 28 9 21025 9 59 54
M-O 0.0 0.0 -5.5891 -5.5891 7 0 0 250 0 0 2
M-P -76.7915 -64.1784 -360.118 -501.0879 119 18 10 14849 3 50 33
M-Q 0.0 0.0 -7.1149 -7.1149 7 0 0 278 0 1 3
M-W 0.0 0.0 -0.0269 -0.0269 5 0 0 22 0 1 2
M-X 0.0 -13.7681 -84.4259 -98.194 51 2 3 4474 0 15 19
N-P 0.0 0.0 -4.3953 -4.3953 9 0 0 221 0 2 8
N-Q -74.0035 -60.9179 -354.002 -488.9234 123 20 10 14540 3 50 32
N-R 0.0 0.0 -4.8898 -4.8898 9 0 0 237 0 2 8
O-P -155.3878 -119.4481 -542.04 -816.8759 160 31 9 21441 10 61 54
O-Q 0.0 0.0 -8.3359 -8.3359 8 0 0 293 0 0 2
O-R -71.2116 -63.6864 -321.687 -456.585 120 17 9 14273 3 50 33
O-U 0.0 0.0 -0.0257 -0.0257 4 0 0 18 0 2 2
P-R 0.0 0.0 -5.7883 -5.7883 9 0 0 246 0 2 9
P-U 0.0 -18.0432 -92.7082 -110.7514 51 2 3 4668 0 16 20
P-X 0.0 0.0 -0.0006 -0.0006 4 0 0 2 0 0 5
Q-R -145.4648 -108.7744 -542.525 -796.7642 157 29 9 21395 9 58 52
S-T -146.6354 -120.5022 -545.247 -812.3846 156 31 9 21558 10 57 52
S-U 0.0 0.0 -6.7314 -6.7314 8 0 0 254 0 1 3
S-V -73.7113 -47.9293 -331.14 -452.7805 118 23 10 14573 3 51 32
S-W 0.0 0.0 -6.2563 -6.2563 8 0 0 258 0 0 2
T-V 0.0 0.0 -5.3748 -5.3748 10 0 0 244 0 2 8
T-W -70.5159 -65.8201 -319.765 -456.1009 120 19 9 14229 3 49 32
T-X 0.0 0.0 -4.5393 -4.5393 8 0 0 214 0 2 9
U-V -146.85 -118.1096 -535.117 -800.0766 161 35 9 21496 9 59 52
U-W 0.0 0.0 -6.4035 -6.4035 9 2 0 309 0 0 2
U-X -61.7502 -36.7114 -341.635 -440.0966 120 17 9 14445 3 50 33
V-X 0.0 0.0 -3.1185 -3.1185 7 0 0 189 0 1 8
W-X -140.5098 -116.9106 -534.797 -792.2174 163 31 9 21450 10 63 55