2C37
rnase ph core of the archaeal exosome in complex with u8 rna
Total interactions analyzed 276
Total true interactions 77
Strongest Interaction Chains O-P
Int. Res. 157
Norm. En. per Res. -5.3646
Hub Node A(7)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -162.0083 -104.9029 -546.168 -813.0793 155 33 9 21067 8 59 55
A-C 0.0 0.0 -0.0028 -0.0028 2 0 0 1 0 0 1
A-D -52.9858 -41.8186 -242.759 -337.5634 99 10 7 10776 5 38 27
A-E 0.0 0.0 -0.0044 -0.0044 3 0 0 2 0 0 1
A-K 0.0 0.0 -0.0135 -0.0135 2 0 0 11 0 1 2
A-L 0.0 -14.7516 -63.3876 -78.1392 51 0 2 3902 0 15 20
A-Q 0.0 0.0 -0.0351 -0.0351 3 0 0 17 0 1 2
B-D 0.0 4.3231 -10.3311 -6.008 9 0 0 412 0 2 9
B-E -55.2627 -51.2187 -258.991 -365.4724 102 18 7 11080 3 40 29
B-F 0.0 3.5849 -6.2281 -2.6432 9 0 0 318 0 2 9
B-N 0.0 0.0 -0.0023 -0.0023 4 0 0 7 0 0 5
B-Q 0.0 -15.1659 -76.7062 -91.8721 51 0 2 4268 0 16 20
C-D -147.398 -111.0252 -532.984 -791.4072 150 36 9 21321 10 56 52
C-E 0.0 0.0 -0.0052 -0.0052 3 0 0 2 0 0 3
C-F -52.8596 -61.3129 -246.902 -361.0745 99 14 7 11092 4 40 29
C-G 0.0 0.0 -0.0295 -0.0295 3 0 0 16 0 1 1
C-S 0.0 0.0 -0.0535 -0.0535 4 0 0 23 0 1 2
C-T 0.0 -18.6013 -98.2656 -116.8669 52 3 3 4831 0 17 21
D-F 0.0 3.9368 -5.5352 -1.5984 9 0 0 309 0 1 9
D-G 0.0 -16.4167 -79.9906 -96.4073 52 2 2 4379 0 15 20
E-F -160.7946 -108.5633 -544.281 -813.6389 155 35 9 21410 9 58 55
E-M 0.0 0.0 -0.013 -0.013 2 0 0 9 0 1 1
E-N 0.0 -16.0383 -80.4989 -96.5372 51 3 2 4387 0 16 20
E-W 0.0 0.0 -0.0371 -0.0371 2 0 0 16 0 1 2
F-T 0.0 0.0 -0.0122 -0.0122 4 0 0 13 0 0 5
F-W 0.0 -16.5305 -78.9751 -95.5056 52 1 2 4337 0 16 20
G-H -154.2306 -112.922 -536.261 -803.4137 156 34 9 21254 9 57 57
G-I 0.0 0.0 -0.0043 -0.0043 3 0 0 2 0 0 2
G-K 0.0 0.0 -0.0159 -0.0159 3 0 0 4 0 0 1
G-L -43.3369 -51.5974 -253.722 -348.6562 100 12 7 10867 5 37 28
G-S 0.0 0.0 -0.041 -0.041 3 0 0 21 0 1 2
H-I -58.9033 -67.9014 -270.648 -397.4526 102 24 7 11638 5 40 30
H-J 0.0 3.6641 -8.4088 -4.7447 9 0 0 365 0 2 9
H-L 0.0 4.8142 -9.1975 -4.3833 9 0 0 400 0 1 9
H-S 0.0 -15.8608 -86.2218 -102.0826 52 2 2 4523 0 16 21
H-V 0.0 0.0 -0.0028 -0.0028 4 0 0 8 0 0 5
I-J -163.2825 -105.5813 -540.097 -808.9608 159 36 9 21542 9 56 53
I-K 0.0 0.0 -0.0195 -0.0195 3 0 0 5 0 1 3
I-O 0.0 0.0 -0.0316 -0.0316 2 0 0 14 0 1 2
I-U 0.0 0.0 -0.0286 -0.0286 3 0 0 14 0 1 2
I-V 0.0 -16.8934 -88.8724 -105.7657 52 3 2 4646 0 17 21
J-K -66.4198 -66.7915 -293.079 -426.2903 106 33 8 12118 5 41 31
J-L 0.0 3.4648 -3.27 0.1947 8 0 0 240 0 1 8
J-O 0.0 -16.333 -84.4308 -100.7638 51 2 2 4457 0 17 21
J-R 0.0 0.0 -0.0118 -0.0118 4 0 0 12 0 0 5
K-L -145.5936 -123.3039 -527.304 -796.2015 151 28 9 21104 9 57 52
K-Q 0.0 0.0 -0.0598 -0.0598 3 0 0 24 0 2 2
K-R 0.0 -17.9636 -96.5292 -114.4928 52 3 3 4791 0 18 21
M-N -163.7738 -101.4505 -558.136 -823.3603 156 29 9 21612 9 59 54
M-O 0.0 0.0 -0.0036 -0.0036 2 0 0 2 0 0 1
M-P -56.3351 -50.5847 -279.435 -386.3547 103 11 7 11504 6 41 30
M-Q 0.0 0.0 -0.0052 -0.0052 3 0 0 2 0 1 3
M-W 0.0 0.0 -0.0273 -0.0273 3 0 0 13 0 1 2
M-X 0.0 -15.4369 -75.8139 -91.2508 50 1 2 4296 0 16 20
N-P 0.0 3.5917 -6.7901 -3.1984 9 0 0 328 0 2 9
N-Q -56.4685 -62.772 -274.352 -393.5925 100 17 7 11360 4 40 29
N-R 0.0 3.8904 -6.9301 -3.0396 9 0 0 333 0 1 9
O-P -184.7233 -119.2487 -538.265 -842.237 157 34 9 21213 8 57 52
O-Q 0.0 0.0 -0.0045 -0.0045 3 0 0 2 0 0 3
O-R -45.8175 -41.1013 -266.824 -353.7428 99 10 7 11101 5 40 27
O-U 0.0 0.0 -0.0476 -0.0476 3 0 0 19 0 1 2
P-R 0.0 3.9543 -9.0268 -5.0725 9 0 0 381 0 2 9
P-U 0.0 -17.6128 -87.9985 -105.6113 52 2 3 4576 0 17 20
P-X 0.0 0.0 -0.001 -0.001 4 0 0 3 0 0 4
Q-R -162.1813 -106.245 -542.892 -811.3183 156 37 9 21385 9 55 52
S-T -161.8721 -100.3146 -526.16 -788.3466 154 30 9 21086 9 56 55
S-U 0.0 0.0 -0.0053 -0.0053 3 0 0 2 0 1 3
S-V -55.5143 -52.4185 -283.142 -391.0748 102 19 7 11558 4 40 29
S-W 0.0 0.0 -0.0027 -0.0027 2 0 0 1 0 0 3
T-V 0.0 4.0639 -7.7392 -3.6753 9 0 0 355 0 2 9
T-W -65.2657 -67.3314 -259.142 -391.7391 99 13 7 11119 5 41 28
T-X 0.0 3.6506 -6.3042 -2.6536 9 0 0 319 0 2 9
U-V -157.7072 -115.9591 -549.947 -823.6133 155 27 9 21568 9 60 56
U-W 0.0 0.0 -0.003 -0.003 2 0 0 1 0 0 1
U-X -49.4201 -46.193 -263.582 -359.1951 99 10 7 11091 4 40 30
V-X 0.0 3.6684 -4.9591 -1.2907 9 0 0 293 0 1 9
W-X -153.7938 -109.6587 -523.798 -787.2506 160 26 9 20810 8 54 56