2BHV

structure of comb10 of the com type iv secretion system of helicobacter pylori

• Total interactions analyzed: 15
• Total true interactions: 13
• Strongest Interaction:
  • Chains: A-E
  • Int. Res.: 143
  • Norm. En. per Res.: -3.8449
• Hub Node: B(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-D	0.0	1.5071	-72.0251	-70.518	33	6	1	3099	0	3	3
A-E	-147.0718	-18.8814	-383.864	-549.8173	143	26	28	17809	0	5	12
A-F	0.0	0.0	-0.0204	-0.0204	3	0	0	18	0	0	0
B-C	-132.9854	-19.3291	-346.643	-498.9575	134	27	22	16621	0	5	9
B-D	-43.7899	-24.8865	-146.416	-215.0924	123	21	0	8467	5	29	32
B-E	0.0	0.0	-0.0008	-0.0008	2	0	0	2	0	0	0
B-F	0.0	0.0	-22.4842	-22.4842	20	0	0	875	0	1	1
C-D	-6.2706	0.0	-31.0586	-37.3292	18	3	0	1069	0	1	0
C-E	-11.8375	-13.0316	-61.2163	-86.0854	61	5	2	3844	2	11	16
C-F	0.0	0.0	-15.5638	-15.5638	27	2	0	1040	0	4	8
D-E	-4.253	16.2312	-27.4774	-15.4992	32	0	0	1081	0	4	5
D-F	-131.6725	-20.8414	-371.741	-524.255	137	31	22	17752	0	8	9
E-F	0.0	6.7397	-69.1017	-62.362	30	5	2	2855	0	3	1

Interface residues

• A-D: ALA180D, ALA196D, ARG320A, ARG347D, ARG351D, ASP312A, GLN197D, GLN317A, GLU199D, GLU348D, GLY215D, GLY288D, GLY311A, GLY323A, GLY349D, ILE183D, ILE195D, LEU182D, LEU290D, LEU314A, LEU315A, LEU318A, LYS214D, LYS217D, MET316A, MET319A, PHE181D, PHE310A, PRO185D, SER322A, SER350D, THR184D, TYR313A
• A-E: ALA341A, ALA341E, ARG232A, ARG232E, ARG335A, ARG335E, ARG347A, ARG347E, ARG351A, ARG351E, ASN224A, ASN224E, ASN225A, ASN225E, ASN226E, ASN287A, ASN287E, ASN327A, ASN327E, ASN331A, ASN331E, ASP234A, ASP234E, ASP312A, GLN317A, GLN317E, GLN321A, GLN321E, GLN328A, GLN328E, GLN332A, GLN332E, GLU230A, GLU230E, GLY229A, GLY229E, GLY288A, GLY288E, GLY292A, GLY292E, GLY311A, GLY311E, GLY323A, GLY323E, GLY325A, GLY325E, GLY349A, GLY349E, ILE186A, ILE186E, ILE235A, ILE235E, ILE291A, ILE291E, ILE293A, ILE293E, ILE326A, ILE326E, ILE333A, ILE333E, ILE343A, ILE343E, ILE346A, ILE346E, ILE354A, LEU182A, LEU182E, LEU233A, LEU233E, LEU280A, LEU280E, LEU285A, LEU285E, LEU289A, LEU289E, LEU290A, LEU290E, LEU314A, LEU314E, LEU315A, LEU315E, LEU318A, LEU318E, LEU334A, LEU334E, LYS227E, LYS337A, LYS337E, MET177A, MET177E, MET316A, MET316E, MET319A, MET319E, MET324A, MET324E, PHE310A, PHE310E, PHE353A, PHE353E, PRO342A, PRO342E, SER188A, SER188E, SER223A, SER223E, SER283A, SER283E, SER295A, SER295E, SER322A, SER322E, SER338A, SER338E, SER350A, SER350E, SER355A, THR284A, THR284E, THR286A, THR286E, THR294A, THR294E, TRP237A, TRP237E, TYR222A, TYR222E, TYR231A, TYR231E, TYR313A, TYR313E, VAL194A, VAL194E, VAL329A, VAL329E, VAL330A, VAL330E, VAL344A, VAL344E, VAL345A, VAL345E, VAL352A, VAL352E
• A-F: GLY311A, LEU314A, LEU314F
• B-C: ALA341B, ALA341C, ARG232B, ARG232C, ARG335B, ARG335C, ARG347B, ARG347C, ARG351B, ARG351C, ASN224B, ASN224C, ASN225B, ASN225C, ASN226B, ASN226C, ASN287B, ASN287C, ASN327B, ASN327C, ASN331B, ASN331C, ASP234B, ASP234C, ASP312C, GLN317B, GLN317C, GLN321B, GLN321C, GLN328B, GLN328C, GLN332B, GLN332C, GLU230B, GLU230C, GLY229B, GLY229C, GLY288B, GLY288C, GLY292B, GLY292C, GLY311C, GLY323B, GLY323C, GLY325B, GLY325C, GLY349B, GLY349C, ILE186B, ILE186C, ILE235B, ILE235C, ILE291B, ILE291C, ILE293B, ILE293C, ILE326B, ILE326C, ILE333B, ILE333C, ILE340C, ILE343B, ILE343C, ILE346B, ILE346C, ILE354C, LEU182B, LEU182C, LEU233B, LEU233C, LEU280B, LEU280C, LEU285B, LEU285C, LEU289B, LEU289C, LEU290B, LEU290C, LEU314B, LEU314C, LEU315B, LEU315C, LEU318B, LEU318C, LEU334B, LEU334C, LYS337B, LYS337C, MET177B, MET177C, MET228B, MET316B, MET316C, MET324B, MET324C, PHE353B, PHE353C, PRO342B, PRO342C, SER188B, SER188C, SER223B, SER283B, SER283C, SER295B, SER322B, SER322C, SER338B, SER338C, SER350B, SER350C, SER355C, THR284B, THR284C, THR286B, THR286C, THR294B, THR294C, TRP237B, TRP237C, TYR231B, TYR231C, TYR313B, TYR313C, VAL329B, VAL329C, VAL330B, VAL330C, VAL344B, VAL344C, VAL345B, VAL345C, VAL352B, VAL352C
• B-D: ALA174B, ALA174D, ARG232B, ARG232D, ARG320B, ARG320D, ARG335B, ARG335D, ASN224B, ASN224D, ASN225B, ASN225D, ASN226B, ASN226D, ASN262B, ASN262D, ASN272B, ASN272D, ASN357B, ASN357D, ASP175B, ASP175D, ASP234B, ASP234D, ASP336B, ASP336D, ASP359B, ASP359D, GLN189B, GLN189D, GLN274B, GLN274D, GLN317B, GLN317D, GLN321B, GLN321D, GLN328B, GLN332B, GLN332D, GLU230B, GLU230D, GLU270B, GLU270D, GLY229B, GLY229D, GLY260D, GLY263B, GLY263D, GLY266B, GLY266D, HIS205B, HIS205D, ILE172B, ILE172D, ILE235B, ILE235D, ILE269B, ILE269D, ILE346B, ILE360B, LEU168B, LEU168D, LEU233B, LEU233D, LEU280B, LEU280D, LEU282B, LEU285B, LEU285D, LEU289B, LEU318B, LEU318D, LEU375B, LEU375D, LYS167B, LYS167D, LYS176B, LYS176D, LYS227B, LYS227D, LYS339B, LYS339D, MET177B, MET177D, MET206B, MET206D, MET228B, MET228D, MET316B, MET316D, MET319B, MET319D, MET324B, MET324D, PHE273B, PHE273D, PHE353D, PRO279B, PRO279D, PRO356B, PRO356D, SER283B, SER283D, SER322B, SER322D, SER355B, SER355D, THR171B, THR171D, THR173B, THR173D, THR284B, THR286B, THR358B, THR358D, TYR231B, TYR231D, VAL236B, VAL236D, VAL265B, VAL265D, VAL278B, VAL278D
• B-E: ARG335B, LYS214E
• B-F: ARG232B, ARG335B, ARG335F, ASN327F, ASN331F, GLN321F, GLN328F, GLN332F, GLU230B, GLY229B, GLY323F, GLY325F, ILE326F, LYS227B, MET228B, MET324F, SER322F, TYR231B, VAL329F, VAL330F
• C-D: ARG232D, ARG335C, ARG335D, ASN327C, ASN331C, GLN328C, GLN332C, GLU230D, GLY229D, GLY323C, GLY325C, ILE326C, LYS227D, MET228D, MET324C, TYR231D, VAL329C, VAL330C
• C-E: ALA174C, ALA209E, ARG170E, ARG232C, ARG271C, ARG275C, ARG366E, ASN166E, ASN225C, ASN272C, ASN357C, ASN368E, ASP175C, ASP201E, ASP234C, ASP359C, GLN274C, GLU230C, GLU270C, GLU367E, GLU369E, GLY207E, GLY245E, GLY266C, GLY277C, HIS244E, ILE246E, ILE269C, ILE364E, LEU169E, LEU211E, LEU280C, LEU285C, LEU375C, LYS167E, LYS176C, LYS208E, LYS214E, LYS376C, MET177C, MET206E, PHE203E, PHE273C, PHE361E, PHE362E, PRO213E, PRO243E, PRO279C, PRO356C, PRO363E, PRO365E, SER283C, SER355C, THR173C, THR242E, THR358C, TYR276C, VAL210E, VAL265C, VAL278C, VAL370E
• C-F: ARG320C, ARG320F, ARG335C, ARG335F, ASN327C, ASN327F, ASN331C, ASN331F, GLN321C, GLN328C, GLN328F, GLN332C, GLN332F, GLY323C, LEU334F, LYS339C, LYS339F, MET228C, MET228F, MET319C, MET319F, MET324C, MET324F, SER322C, SER322F, SER338C, SER338F
• D-E: ARG347D, ARG347E, ARG351D, ARG351E, ASN287D, ASN287E, GLU199D, GLU199E, GLY288D, GLY288E, GLY349D, GLY349E, ILE291D, ILE291E, LEU289D, LEU289E, LEU290D, LEU290E, LYS214D, LYS214E, PHE181D, PHE181E, PHE353D, PHE353E, PRO179D, PRO179E, SER350D, SER350E, THR286D, THR286E, VAL352D, VAL352E
• D-F: ALA341D, ALA341F, ARG232D, ARG232F, ARG335D, ARG335F, ARG347D, ARG347F, ARG351D, ARG351F, ASN224D, ASN224F, ASN225D, ASN225F, ASN226D, ASN226F, ASN287D, ASN287F, ASN327D, ASN327F, ASN331D, ASN331F, ASP234D, ASP234F, ASP312F, GLN317D, GLN317F, GLN321D, GLN321F, GLN328D, GLN328F, GLN332D, GLN332F, GLU230D, GLU230F, GLY229D, GLY229F, GLY288D, GLY288F, GLY292D, GLY292F, GLY311D, GLY323D, GLY323F, GLY325D, GLY325F, GLY349D, GLY349F, ILE186D, ILE186F, ILE235D, ILE235F, ILE291D, ILE291F, ILE293D, ILE293F, ILE326D, ILE326F, ILE333D, ILE333F, ILE340F, ILE343D, ILE343F, ILE346D, ILE346F, ILE354D, LEU182D, LEU182F, LEU233D, LEU233F, LEU280D, LEU280F, LEU285D, LEU285F, LEU289D, LEU289F, LEU290D, LEU290F, LEU314D, LEU314F, LEU315D, LEU315F, LEU318D, LEU318F, LEU334D, LEU334F, LYS337D, LYS337F, MET177D, MET177F, MET228F, MET316D, MET316F, MET319D, MET324D, MET324F, PHE310D, PHE353D, PHE353F, PRO342D, PRO342F, SER188D, SER188F, SER283D, SER283F, SER322D, SER322F, SER338D, SER338F, SER350D, SER350F, SER355D, SER355F, THR284D, THR284F, THR286D, THR286F, THR294D, THR294F, TRP237D, TRP237F, TYR222F, TYR231D, TYR231F, TYR313D, TYR313F, VAL194F, VAL329D, VAL329F, VAL330D, VAL330F, VAL344D, VAL344F, VAL345D, VAL345F, VAL352D, VAL352F
• E-F: ALA180E, ALA196E, ARG320F, ARG347E, ARG351E, ASP312F, GLN197E, GLN317F, GLU199E, GLU348E, GLY215E, GLY288E, GLY349E, ILE183E, ILE195E, LEU182E, LEU290E, LEU314F, LEU315F, LEU318F, LYS214E, LYS217E, MET316F, MET319F, PHE181E, PRO185E, SER322F, SER350E, THR184E, TYR313F