2B9N
50s ribosomal subunit from a crystal structure of release factor rf2, trnas and mrna bound to the ribosome. this file contains the 50s subunit from a crystal structure of release factor rf1, trnas and mrna bound to the ribosome and is described in remark 400.
Total interactions analyzed 465
Total true interactions 24
Strongest Interaction Chains 6-8
Int. Res. 19
Norm. En. per Res. -1.2035
Hub Node E(4)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
E-N 0.0 -2.9962 -1.2083 -4.2045 8 0 0 139 0 3 0
E-O 0.0 3.0192 -18.5201 -15.5009 15 0 0 607 0 4 4
E-T 0.0 0.0 -0.5847 -0.5847 7 0 0 99 0 1 0
E-5 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 1
F-W 0.0 0.0 -1.2467 -1.2467 5 0 0 161 0 0 1
F-U 0.0 0.0 -0.3948 -0.3948 6 0 0 143 0 0 3
G-S 0.0 -1.2588 190.489 189.2302 14 44 0 1216 2 11 15
H-9 0.0 0.0 -0.0361 -0.0361 6 0 0 25 0 0 2
I-4 0.0 -3.642 -4.2962 -7.9382 22 0 0 511 0 10 8
N-U 0.0 0.0 -1.9822 -1.9822 9 0 0 222 0 4 1
O-T -24.6451 22.4426 104.422 102.2194 57 39 2 6047 0 22 23
P-8 0.0 2.2109 -6.4909 -4.28 15 0 0 967 0 0 11
Q-Z -39.785 -8.2381 99.1314 51.1083 88 89 1 7343 0 17 18
Q-0 0.0 0.0 -0.1889 -0.1889 15 3 0 376 0 1 1
Q-K 0.0 0.0 -0.0719 -0.0719 3 0 0 18 0 0 0
S-0 0.0 1.3928 -11.3096 -9.9168 28 0 0 909 0 2 8
W-R 0.0 0.0 -6.909 -6.909 17 0 0 465 0 5 7
W-5 0.0 12.9486 -69.1853 -56.2367 53 23 6 4836 0 13 26
X-2 -8.3757 -8.3202 -7.1538 -23.8497 38 40 2 3228 3 11 16
Z-K 0.0 0.0 -15.8533 -15.8533 17 0 0 961 0 4 2
R-5 -3.9321 2.5638 7.737 6.3688 40 23 2 2825 0 9 14
U-V -112.5796 67.0675 684.627 639.115 98 258 3 11486 0 24 54
U-5 0.0 0.0 -0.2893 -0.2893 9 0 0 93 0 0 4
6-8 0.0 0.7324 -23.5993 -22.8669 19 1 0 1247 0 2 6