2B34

structure of mar1 ribonuclease from caenorhabditis elegans

• Total interactions analyzed: 28
• Total true interactions: 16
• Strongest Interaction:
  • Chains: A-D
  • Int. Res.: 113
  • Norm. En. per Res.: -4.8128
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-77.3653	-72.7759	-312.159	-462.3001	114	13	9	12084	6	33	26
A-C	0.0	5.5164	-15.6119	-10.0955	27	2	1	897	0	4	9
A-D	-95.9298	-90.0753	-357.844	-543.8492	113	15	8	13222	8	31	26
B-C	-93.1861	-76.9273	-352.438	-522.5514	112	10	8	12820	8	32	24
B-D	0.0	8.7736	-28.2283	-19.4547	35	0	1	1396	0	6	12
B-G	0.0	-0.2278	-4.036	-4.2638	13	0	0	413	0	6	5
C-D	-112.8106	-65.6944	-343.75	-522.255	113	15	8	12785	8	31	26
C-F	0.0	2.1396	-0.59	1.5496	9	0	0	186	0	3	3
C-G	0.0	0.4686	-19.0432	-18.5746	21	0	0	748	1	12	12
D-H	0.0	0.0	-22.3243	-22.3243	29	0	0	1024	0	10	11
E-F	-77.5818	-71.1968	-346.504	-495.2826	115	16	9	13112	6	31	24
E-G	-5.3806	6.9786	-22.521	-20.923	24	0	1	1006	0	5	9
E-H	-89.7474	-72.3351	-348.415	-510.4975	111	16	8	12560	6	31	29
F-G	-72.4199	-72.6249	-332.363	-477.4078	113	10	8	12411	6	33	27
F-H	0.0	5.6911	-17.5655	-11.8744	23	0	1	849	0	4	8
G-H	-74.1344	-81.4756	-321.131	-476.7411	110	9	9	12017	8	33	26

Interface residues

• A-B: ALA111B, ALA147B, ALA154A, ALA154B, ALA156A, ALA163A, ALA188A, ALA8A, ARG125B, ARG139B, ARG144A, ARG144B, ARG42A, ARG9A, ASN29B, ASP121B, ASP134A, ASP143B, ASP173A, ASP190A, ASP190B, CYS114B, CYS90B, GLN117B, GLN150B, GLN153A, GLN153B, GLN181A, GLN59B, GLU110B, GLU124B, GLU152A, GLU152B, GLU162A, GLY155A, GLY167A, GLY170A, GLY171A, GLY192A, GLY192B, GLY63B, HIS112B, HIS130A, HIS141B, HIS145A, HIS145B, HIS174A, ILE10A, ILE157A, ILE165A, ILE184A, LEU116B, LEU122B, LEU123A, LEU123B, LEU158A, LEU166A, LEU168A, LEU183A, LEU185A, LEU193A, LEU193B, LEU196A, LEU196B, LEU199A, LEU64B, LYS149A, LYS149B, LYS178A, LYS198A, LYS31B, LYS84B, LYS86B, MET151A, MET151B, PHE146B, PHE148A, PHE148B, PHE177A, PHE87B, PRO189A, PRO195A, PRO195B, SER138B, SER140B, SER161A, SER172A, SER187A, SER197A, SER197B, SER88B, THR118B, THR119B, THR142B, THR159A, THR160A, THR164A, THR186A, THR191A, THR191B, THR39A, THR85B, TYR120B, TYR32B, TYR60B, VAL113B, VAL129A, VAL131A, VAL132A, VAL133A, VAL169A, VAL180A, VAL194A, VAL194B
• A-C: ARG144A, ASP190A, GLU152A, GLU152C, GLY192A, HIS141A, HIS145A, HIS145C, LEU193A, LEU196A, LEU196C, LEU199A, LEU199C, LYS149A, LYS149C, LYS198A, LYS198C, LYS31A, PRO195A, PRO195C, SER140A, SER197A, SER197C, THR142A, THR191A, TYR32A, VAL194A
• A-D: ALA111A, ALA147A, ALA154A, ALA154D, ALA156D, ALA163D, ALA188D, ALA8D, ARG125A, ARG139A, ARG144A, ARG144D, ARG42D, ARG9D, ASN29A, ASP121A, ASP134D, ASP143A, ASP173D, ASP190A, ASP190D, CYS114A, CYS90A, GLN117A, GLN150A, GLN153A, GLN153D, GLN181D, GLN59A, GLU110A, GLU124A, GLU152A, GLU152D, GLU162D, GLY155D, GLY167D, GLY170D, GLY171D, GLY192A, GLY192D, HIS112A, HIS130D, HIS141A, HIS145A, HIS145D, HIS174D, ILE10D, ILE157D, ILE165D, ILE184D, LEU116A, LEU122A, LEU123A, LEU158D, LEU166D, LEU168D, LEU183D, LEU185D, LEU193A, LEU193D, LEU196A, LEU196D, LEU199A, LEU199D, LEU64A, LYS149A, LYS149D, LYS178D, LYS198A, LYS198D, LYS31A, LYS84A, LYS86A, MET151A, MET151D, PHE146A, PHE148D, PHE177D, PHE87A, PRO189D, PRO195A, PRO195D, SER138A, SER140A, SER161D, SER172D, SER187D, SER197A, SER197D, SER88A, THR118A, THR119A, THR142A, THR159D, THR160D, THR164D, THR186D, THR191A, THR191D, THR39D, THR85A, TYR120A, TYR32A, TYR60A, VAL113A, VAL129D, VAL131D, VAL132D, VAL133D, VAL169D, VAL180D, VAL194A, VAL194D
• B-C: ALA111C, ALA147C, ALA154B, ALA154C, ALA156B, ALA163B, ALA188B, ALA8B, ARG125C, ARG139C, ARG144B, ARG144C, ARG42B, ARG9B, ASN29C, ASP121C, ASP134B, ASP143C, ASP173B, ASP190B, ASP190C, CYS114C, CYS90C, GLN117C, GLN150C, GLN153B, GLN153C, GLN181B, GLN59C, GLU110C, GLU124C, GLU152B, GLU152C, GLU162B, GLY155B, GLY167B, GLY170B, GLY171B, GLY192B, GLY192C, HIS112C, HIS130B, HIS141C, HIS145B, HIS145C, HIS174B, ILE10B, ILE157B, ILE165B, ILE184B, LEU116C, LEU122C, LEU123C, LEU158B, LEU166B, LEU168B, LEU183B, LEU185B, LEU193B, LEU193C, LEU196B, LEU196C, LEU199B, LEU64C, LYS149B, LYS149C, LYS178B, LYS198B, LYS198C, LYS31C, LYS62C, LYS84C, LYS86C, MET151B, MET151C, PHE146C, PHE148B, PHE177B, PHE87C, PRO189B, PRO195B, PRO195C, SER138C, SER140C, SER161B, SER172B, SER187B, SER197B, SER197C, SER88C, THR118C, THR119C, THR142C, THR159B, THR160B, THR164B, THR186B, THR191B, THR191C, THR39B, THR85C, TYR120C, TYR32C, TYR60C, VAL113C, VAL129B, VAL131B, VAL133B, VAL169B, VAL180B, VAL194B, VAL194C
• B-D: ARG144B, ARG144D, ASP190B, ASP190D, GLU152B, GLU152D, GLY192B, GLY192D, HIS141B, HIS141D, HIS145B, HIS145D, LEU193B, LEU193D, LEU196B, LEU196D, LEU199B, LEU199D, LYS149D, LYS198B, LYS198D, LYS31B, LYS31D, PRO195B, PRO195D, SER140B, SER197B, THR142B, THR142D, THR191B, THR191D, TYR32B, TYR32D, VAL194B, VAL194D
• B-G: ALA8B, ARG9B, ASN103B, ASN11B, ASN128B, ASN14B, ASP96G, GLN102B, GLU95G, GLY126B, LEU123B, LYS100G, LYS99G
• C-D: ALA111D, ALA147D, ALA154C, ALA154D, ALA156C, ALA163C, ALA188C, ALA8C, ARG125D, ARG139D, ARG144C, ARG144D, ARG42C, ARG9C, ASN29D, ASP121D, ASP134C, ASP143D, ASP173C, ASP190C, ASP190D, CYS114D, CYS90D, GLN117D, GLN150D, GLN153C, GLN153D, GLN181C, GLN59D, GLU110D, GLU124D, GLU152C, GLU152D, GLU162C, GLY155C, GLY167C, GLY170C, GLY171C, GLY192C, GLY192D, HIS112D, HIS130C, HIS141D, HIS145C, HIS145D, HIS174C, ILE10C, ILE157C, ILE165C, ILE184C, LEU116D, LEU122D, LEU123D, LEU158C, LEU166C, LEU168C, LEU183C, LEU185C, LEU193C, LEU193D, LEU196C, LEU196D, LEU199C, LEU64D, LYS149C, LYS149D, LYS178C, LYS198C, LYS198D, LYS31D, LYS84D, LYS86D, MET151C, MET151D, PHE146D, PHE148C, PHE177C, PHE87D, PRO189C, PRO189D, PRO195C, PRO195D, SER138D, SER140D, SER161C, SER172C, SER187C, SER197C, SER197D, SER88D, THR118D, THR119D, THR142D, THR159C, THR160C, THR164C, THR186C, THR191C, THR191D, THR39C, THR85D, TYR120D, TYR32D, TYR60D, VAL113D, VAL129C, VAL131C, VAL132C, VAL133C, VAL169C, VAL180C, VAL194C, VAL194D
• C-F: ALA8F, ARG9F, ASN11F, ASN14F, ASP96C, GLN102F, GLY126F, LYS100C, LYS99C
• C-G: ARG125C, ARG125G, ASN128C, ASP121C, ASP121G, GLN102C, GLU124C, GLU124G, GLU95G, GLY126C, GLY126G, LEU122C, LEU122G, LEU123C, LEU123G, LEU127C, LEU127G, LEU98G, LYS99C, LYS99G, TYR120C
• D-H: ARG125D, ARG125H, ASN103D, ASN103H, ASN11D, ASN14D, ASN14H, ASP96D, ASP96H, GLN102D, GLN102H, GLU124D, GLU124H, GLU95D, GLU95H, GLY126D, GLY126H, LEU123H, LEU127D, LEU127H, LEU98D, LEU98H, LYS100D, LYS100H, LYS99D, LYS99H, THR13D, VAL101D, VAL101H
• E-F: ALA111F, ALA147F, ALA154F, ALA156E, ALA163E, ALA188E, ALA8E, ARG125F, ARG139F, ARG144E, ARG144F, ARG42E, ARG9E, ASN29F, ASP121F, ASP134E, ASP143F, ASP173E, ASP190E, ASP190F, CYS114F, CYS90F, GLN117F, GLN150F, GLN153E, GLN153F, GLN181E, GLN59F, GLU110F, GLU124F, GLU152E, GLU152F, GLU162E, GLY155E, GLY167E, GLY170E, GLY171E, GLY192E, GLY192F, GLY63F, HIS112F, HIS130E, HIS141F, HIS145E, HIS145F, HIS174E, ILE10E, ILE157E, ILE165E, ILE184E, LEU116F, LEU122F, LEU123F, LEU158E, LEU166E, LEU168E, LEU183E, LEU185E, LEU193E, LEU193F, LEU196E, LEU196F, LEU199E, LEU199F, LEU64F, LYS149E, LYS149F, LYS178E, LYS198E, LYS198F, LYS31F, LYS84F, LYS86F, MET151E, MET151F, PHE146F, PHE148E, PHE148F, PHE177E, PHE87F, PRO175E, PRO189E, PRO195E, PRO195F, SER138F, SER140F, SER161E, SER172E, SER187E, SER197E, SER197F, SER88F, THR118F, THR119F, THR142F, THR159E, THR160E, THR164E, THR186E, THR191E, THR191F, THR39E, THR85F, TYR120F, TYR32F, TYR60F, VAL113F, VAL129E, VAL131E, VAL132E, VAL133E, VAL169E, VAL180E, VAL194E, VAL194F
• E-G: ARG144G, ASP190G, GLY192G, HIS141G, HIS145E, HIS145G, LEU193G, LEU196E, LEU196G, LEU199E, LEU199G, LYS149E, LYS149G, LYS198E, LYS31G, PRO195E, PRO195G, SER140G, SER197G, THR142E, THR142G, THR191G, TYR32G, VAL194G
• E-H: ALA111E, ALA147E, ALA154E, ALA154H, ALA156H, ALA163H, ALA188H, ALA8H, ARG125E, ARG139E, ARG144E, ARG144H, ARG42H, ARG9H, ASN29E, ASP121E, ASP134H, ASP143E, ASP173H, ASP190E, ASP190H, CYS114E, CYS90E, GLN117E, GLN150E, GLN153E, GLN153H, GLN181H, GLN59E, GLU110E, GLU124E, GLU152E, GLU152H, GLU162H, GLY155H, GLY167H, GLY170H, GLY171H, GLY192E, GLY192H, HIS112E, HIS130H, HIS141E, HIS145E, HIS145H, HIS174H, ILE10H, ILE157H, ILE165H, ILE184H, LEU116E, LEU122E, LEU123E, LEU158H, LEU166H, LEU168H, LEU183H, LEU185H, LEU193E, LEU193H, LEU196E, LEU196H, LEU199H, LEU64E, LYS149E, LYS149H, LYS178H, LYS198E, LYS198H, LYS31E, LYS84E, LYS86E, MET151E, MET151H, PHE146E, PHE148H, PHE177H, PHE87E, PRO189H, PRO195E, PRO195H, SER138E, SER140E, SER161H, SER172H, SER187H, SER197E, SER197H, SER88E, THR118E, THR119E, THR142E, THR159H, THR160H, THR164H, THR186H, THR191E, THR191H, THR85E, TYR120E, TYR32E, TYR60E, VAL113E, VAL129H, VAL131H, VAL132H, VAL133H, VAL169H, VAL180H, VAL194E, VAL194H
• F-G: ALA111G, ALA147G, ALA154F, ALA154G, ALA156F, ALA163F, ALA188F, ALA8F, ARG125G, ARG139G, ARG144F, ARG144G, ARG42F, ARG9F, ASN29G, ASP121G, ASP134F, ASP143G, ASP173F, ASP190F, ASP190G, CYS114G, CYS90G, GLN117G, GLN150G, GLN153F, GLN153G, GLN181F, GLN59G, GLU110G, GLU124G, GLU152F, GLU152G, GLU162F, GLU35G, GLY155F, GLY167F, GLY170F, GLY171F, GLY192F, GLY192G, HIS112G, HIS130F, HIS141G, HIS145F, HIS145G, HIS174F, ILE10F, ILE157F, ILE165F, ILE184F, LEU116G, LEU122G, LEU123G, LEU158F, LEU166F, LEU168F, LEU183F, LEU185F, LEU193F, LEU193G, LEU196F, LEU196G, LEU199F, LEU199G, LEU64G, LYS149F, LYS149G, LYS178F, LYS198F, LYS198G, LYS31G, LYS84G, LYS86G, MET151F, MET151G, PHE146G, PHE148F, PHE148G, PHE177F, PHE87G, PRO189F, PRO195F, PRO195G, SER138G, SER140G, SER161F, SER172F, SER187F, SER197F, SER197G, SER88G, THR118G, THR119G, THR142G, THR159F, THR160F, THR164F, THR186F, THR191F, THR191G, THR85G, TYR120G, TYR32G, TYR60G, VAL113G, VAL129F, VAL131F, VAL133F, VAL169F, VAL180F, VAL194F, VAL194G
• F-H: ARG144F, GLU152F, GLY192F, HIS141F, HIS145F, HIS145H, LEU193F, LEU196F, LEU196H, LEU199F, LEU199H, LYS149F, LYS149H, LYS198H, LYS31F, PRO195F, PRO195H, SER140F, SER197H, THR142F, THR191F, TYR32F, VAL194F
• G-H: ALA111H, ALA147H, ALA154G, ALA154H, ALA156G, ALA163G, ALA188G, ALA8G, ARG125H, ARG139H, ARG144G, ARG144H, ARG42G, ARG9G, ASN29H, ASP121H, ASP134G, ASP143H, ASP173G, ASP190G, ASP190H, CYS114H, CYS90H, GLN117H, GLN150H, GLN153G, GLN153H, GLN181G, GLN59H, GLU110H, GLU124H, GLU152G, GLU152H, GLU162G, GLY155G, GLY167G, GLY170G, GLY171G, GLY192G, GLY192H, HIS112H, HIS130G, HIS141H, HIS145G, HIS145H, HIS174G, ILE10G, ILE157G, ILE165G, ILE184G, LEU116H, LEU122H, LEU123H, LEU158G, LEU166G, LEU168G, LEU183G, LEU185G, LEU193G, LEU193H, LEU196G, LEU196H, LEU199G, LEU64H, LYS149G, LYS149H, LYS178G, LYS198G, LYS31H, LYS84H, LYS86H, MET151G, MET151H, PHE146H, PHE148G, PHE177G, PHE87H, PRO189G, PRO195G, PRO195H, SER138H, SER140H, SER161G, SER172G, SER187G, SER197G, SER197H, SER88H, THR118H, THR119H, THR142H, THR159G, THR160G, THR164G, THR186G, THR191G, THR191H, THR85H, TYR120H, TYR32H, TYR60H, VAL113H, VAL129G, VAL131G, VAL132G, VAL133G, VAL169G, VAL180G, VAL194G, VAL194H