2AXT
crystal structure of photosystem ii from thermosynechococcus elongatus
Total interactions analyzed 630
Total true interactions 149
Strongest Interaction Chains c-t
Int. Res. 16
Norm. En. per Res. -6.0398
Hub Node A(29)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -40.4895 -11.7274 -105.766 -157.9829 58 12 4 5011 0 12 10
A-C -75.6339 -13.8351 -780.538 -870.007 277 44 20 31698 6 29 32
A-D -125.5969 -53.2856 -1545.68 -1724.5625 412 105 48 63536 9 54 58
A-E -18.9899 0.3417 -64.9382 -83.5864 39 1 1 2657 0 5 5
A-F 0.0 -2.6094 -5.3661 -7.9756 10 0 0 295 0 1 2
A-I -13.0397 -25.8453 -222.986 -261.871 79 8 6 8614 4 6 9
A-J 0.0 0.0 -23.4486 -23.4486 23 1 1 1148 0 0 0
A-L -14.595 4.8589 -44.0577 -53.7938 38 6 1 1867 0 2 2
A-M 0.0 0.0 -4.8997 -4.8997 12 0 0 187 0 0 0
A-O -32.4145 -42.2086 -157.117 -231.74 76 23 2 7309 0 23 17
A-T 0.0 0.0 -88.736 -88.736 48 7 4 4229 0 2 2
A-U 0.0 0.0 -23.5464 -23.5464 11 2 0 663 0 2 1
A-V -17.0969 -0.8809 -104.759 -122.7367 60 11 3 5265 2 14 15
A-X 0.0 0.0 -0.0788 -0.0788 5 0 0 30 0 0 0
A-b 0.0 0.0 -2.1736 -2.1736 20 0 1 313 0 0 2
B-D -101.1902 -54.9226 -595.776 -751.8889 236 35 25 26183 8 37 33
B-E 0.0 0.0 -1.2965 -1.2965 4 0 0 127 0 1 1
B-H -52.593 -27.1608 -466.45 -546.2038 153 58 10 18811 1 21 19
B-L -19.5717 10.6032 -155.613 -164.5814 56 10 3 5690 0 6 6
B-M 0.0 4.0261 -11.3827 -7.3566 26 0 0 791 0 2 1
B-O -36.3905 -67.0538 -172.644 -276.0883 75 5 2 6657 5 17 24
B-U -11.2223 -7.3959 -76.886 -95.5041 49 9 1 3633 2 22 20
B-V 0.0 0.0 -0.0149 -0.0149 6 0 0 14 0 2 2
B-X 0.0 0.0 -7.1543 -7.1543 11 7 0 558 0 0 0
B-a 0.0 0.0 -1.7216 -1.7216 19 0 1 244 0 0 2
B-m 0.0 0.0 -0.0048 -0.0048 4 0 0 7 0 0 0
B-o 0.0 0.0 -28.9839 -28.9839 41 0 0 1705 0 18 20
B-t 0.0 0.0 -11.169 -11.169 21 0 0 664 0 0 0
C-D -48.2899 -95.2132 -208.655 -352.1582 88 27 6 7934 7 12 14
C-I -5.5162 -19.7588 -70.4325 -95.7076 42 13 1 3322 1 12 13
C-J 0.0 0.0 -7.6083 -7.6083 16 0 0 407 0 0 0
C-K -6.0864 -16.912 -182.764 -205.7624 81 10 11 7745 1 9 5
C-O -49.0749 -58.1994 -360.626 -467.9004 110 22 2 13707 4 20 22
C-T -19.7891 -41.6405 -34.0193 -95.4489 16 7 0 1231 3 2 1
C-U -7.9859 -6.7918 -104.13 -118.9077 45 2 3 4375 0 6 9
C-V -24.6492 -43.6244 -169.303 -237.5766 93 3 4 8112 4 29 22
C-X 0.0 0.0 -0.7568 -0.7568 13 0 0 148 0 0 0
C-Z 0.0 0.0 -68.0581 -68.0581 52 4 7 3157 0 2 2
C-l 0.0 0.0 -0.0107 -0.0107 2 0 0 2 0 0 1
D-E -31.3591 -46.3024 -341.633 -419.2945 111 26 12 14213 3 14 15
D-F -12.5192 0.0 -98.7833 -111.3025 53 6 3 4224 0 2 2
D-H -5.3027 0.0 -59.3306 -64.6333 36 2 0 2454 0 1 1
D-J 0.0 0.0 -17.1859 -17.1859 17 0 0 601 0 0 0
D-K 0.0 0.0 -0.3838 -0.3838 3 0 0 32 0 0 1
D-L -18.5956 0.0 -84.6746 -103.2702 49 2 0 3072 0 0 0
D-M 0.0 7.7619 -28.498 -20.7361 15 2 0 1299 0 1 4
D-O -2.9879 26.8762 -122.231 -98.3427 72 6 4 6175 2 36 33
D-T 0.0 0.0 -31.3139 -31.3139 33 0 3 1558 0 1 2
D-U -10.2945 -3.2523 -21.049 -34.5958 15 0 1 860 0 2 2
D-V 0.0 4.2638 -35.8616 -31.5978 19 1 1 1503 0 4 4
D-X 0.0 0.0 -112.422 -112.422 64 7 0 6262 0 0 0
E-F 0.0 -18.0155 -199.919 -217.9344 71 7 11 7388 0 4 4
E-H 0.0 0.0 -18.366 -18.366 11 0 0 666 0 1 0
E-J -12.0933 0.0 -62.9224 -75.0157 33 8 2 2543 0 1 2
E-V 0.0 8.8471 -27.1542 -18.3071 23 3 0 975 0 7 8
E-X 0.0 0.0 -89.8457 -89.8457 62 15 0 6281 0 0 0
F-J 0.0 0.0 -70.3066 -70.3066 33 10 4 3270 0 0 0
F-V -2.5082 -26.3314 -13.9884 -42.828 11 1 0 583 2 3 2
F-X 0.0 0.0 -5.1169 -5.1169 29 0 0 582 0 0 0
H-L 0.0 -1.3557 -0.1931 -1.5488 3 0 0 46 0 1 0
H-X -2.4524 0.0 -77.2403 -79.6927 37 11 0 3699 0 0 0
J-K 0.0 0.0 -30.9999 -30.9999 25 5 2 1266 0 0 0
J-V 0.0 0.0 -5.6305 -5.6305 7 0 0 396 0 0 0
J-X 0.0 0.0 -24.1578 -24.1578 25 2 0 1266 0 0 0
K-X 0.0 0.0 -70.4337 -70.4337 52 15 0 4527 0 0 0
K-Z 0.0 0.0 -40.2094 -40.2094 33 12 3 2147 0 0 0
L-M -24.0794 -13.8958 -191.955 -229.9302 62 13 14 8391 0 1 1
L-T -14.2557 -10.8047 -158.566 -183.6264 51 3 12 6128 0 1 3
L-c 0.0 0.0 -0.0021 -0.0021 2 0 0 1 0 0 1
L-m 0.0 0.0 -15.43 -15.43 11 0 0 528 0 2 2
L-t 0.0 0.0 -0.0057 -0.0057 3 0 0 3 0 0 0
M-T 0.0 0.0 -23.1163 -23.1163 26 0 0 1432 0 1 2
M-b 0.0 0.0 -0.0094 -0.0094 5 0 0 6 0 0 0
M-l -9.1862 0.0 -15.8076 -24.9938 11 2 0 529 0 2 2
M-m 0.0 0.0 -134.876 -134.876 60 6 12 6999 0 2 2
M-t 0.0 0.0 -1.8288 -1.8288 6 0 0 144 0 0 0
O-U -2.1495 9.9897 -104.496 -96.6558 62 2 12 4952 0 22 13
O-b 0.0 0.0 -35.2614 -35.2614 44 0 0 1877 0 19 21
T-b 0.0 0.0 -13.7695 -13.7695 22 0 0 766 0 0 0
T-l 0.0 0.0 -0.0089 -0.0089 3 0 0 4 0 1 0
T-m 0.0 0.0 -1.8997 -1.8997 6 0 0 148 0 0 0
U-V -30.9919 -10.5911 -140.809 -182.392 66 10 4 6157 1 13 8
X-Z 0.0 0.0 -52.3312 -52.3312 40 11 0 3800 0 0 0
a-b -38.8481 -11.6444 -100.566 -151.0585 58 13 4 4997 0 12 10
a-c -95.1743 -14.218 -778.24 -887.6323 277 49 19 31759 6 29 32
a-d -129.6193 -55.3759 -1549.48 -1734.4752 409 109 48 63501 9 55 58
a-e -19.6014 0.372 -64.0498 -83.2792 38 2 1 2660 0 5 5
a-f 0.0 -2.6277 -5.3365 -7.9642 10 0 0 293 0 1 2
a-i -24.2606 -26.0065 -225.97 -276.2371 79 6 6 8622 4 6 9
a-j 0.0 0.0 -24.1289 -24.1289 23 1 1 1157 0 0 0
a-l 0.0 4.9094 -44.3359 -39.4265 38 5 1 1858 0 2 2
a-m 0.0 0.0 -5.1589 -5.1589 12 0 0 191 0 0 0
a-o -32.1545 -42.441 -160.034 -234.6295 75 23 2 7314 0 23 17
a-t 0.0 0.0 -89.0876 -89.0876 48 9 4 4246 0 2 2
a-u -9.1063 0.0 -22.6953 -31.8016 10 3 0 679 0 2 1
a-v -20.8933 -1.0581 -107.275 -129.2264 58 11 3 5248 2 14 15
a-x 0.0 0.0 -0.0664 -0.0664 5 0 0 28 0 0 0
b-d -82.721 -53.6713 -601.527 -737.9193 235 33 25 26201 8 37 33
b-e 0.0 0.0 -1.3051 -1.3051 4 0 0 127 0 1 1
b-h -51.5713 -27.738 -463.599 -542.9083 153 59 11 18794 1 21 19
b-l -19.685 10.3712 -155.833 -165.1468 56 10 3 5702 0 6 6
b-m 0.0 4.0333 -11.8081 -7.7748 26 0 0 803 0 2 1
b-o -35.8764 -66.9413 -172.61 -275.4277 76 8 2 6696 5 17 24
b-u -9.4163 -6.4962 -78.9076 -94.8201 48 7 1 3657 2 22 20
b-v 0.0 0.0 -0.0183 -0.0183 6 0 0 16 0 2 2
b-x 0.0 0.0 -6.5211 -6.5211 11 7 0 573 0 0 0
c-d -62.407 -94.2326 -207.678 -364.3176 87 26 6 7971 7 12 14
c-i -5.5462 -19.8592 -75.7163 -101.1217 38 14 1 3328 1 12 13
c-j 0.0 0.0 -7.4542 -7.4542 16 0 0 402 0 0 0
c-k -15.3723 -17.4334 -182.026 -214.8317 80 11 11 7715 1 9 5
c-o -61.123 -57.754 -357.051 -475.928 110 22 2 13791 4 20 22
c-t -21.4614 -41.6592 -33.5164 -96.637 16 7 0 1245 3 2 1
c-u -8.6978 -6.6856 -105.71 -121.0935 45 2 3 4387 0 6 9
c-v -25.8589 -43.5428 -170.56 -239.9616 93 5 4 8132 4 29 21
c-x 0.0 0.0 -0.8236 -0.8236 13 0 0 158 0 0 0
c-z 0.0 0.0 -63.1397 -63.1397 52 6 7 3181 0 2 2
d-e -23.0521 -45.2925 -343.567 -411.9116 109 28 13 14196 3 14 15
d-f -8.0792 0.0 -95.4718 -103.551 54 6 3 4217 0 2 2
d-h -5.1003 0.0 -59.2671 -64.3674 36 3 0 2452 0 1 1
d-j 0.0 0.0 -17.2329 -17.2329 18 0 0 612 0 0 0
d-k 0.0 0.0 -0.4327 -0.4327 3 0 0 35 0 0 1
d-l -19.426 0.0 -82.8131 -102.2391 49 4 0 3067 0 0 0
d-m 0.0 7.6857 -28.0348 -20.3491 15 2 0 1292 0 1 4
d-o -3.3043 28.5599 -123.816 -98.5605 71 3 4 6204 2 36 33
d-t 0.0 0.0 -31.5155 -31.5155 32 0 3 1573 0 1 2
d-u -9.7816 -3.3156 -21.2327 -34.3299 15 0 1 862 0 2 2
d-v 0.0 4.3 -36.3168 -32.0168 20 2 1 1509 0 4 3
d-x 0.0 0.0 -112.248 -112.248 64 11 0 6272 0 0 0
e-f 0.0 -18.273 -202.591 -220.864 71 8 11 7417 0 4 4
e-h 0.0 0.0 -18.4159 -18.4159 11 0 0 668 0 1 0
e-j -12.0296 0.0 -63.4572 -75.4868 32 8 2 2543 0 1 2
e-v 0.0 8.7611 -26.9632 -18.2021 23 4 0 984 0 7 8
e-x 0.0 0.0 -96.3806 -96.3806 63 17 0 6271 0 0 0
f-j 0.0 0.0 -70.2409 -70.2409 33 10 4 3259 0 0 0
f-v -2.614 -26.2209 -13.8962 -42.7311 11 2 0 584 2 3 2
f-x 0.0 0.0 -5.0273 -5.0273 28 0 0 577 0 0 0
h-l 0.0 -1.3701 -0.2143 -1.5843 3 0 0 50 0 1 0
h-x -2.5519 0.0 -77.2592 -79.8111 37 11 0 3688 0 0 0
j-k 0.0 0.0 -32.9785 -32.9785 25 5 2 1272 0 0 0
j-v 0.0 0.0 -5.5388 -5.5388 7 0 0 395 0 0 0
j-x 0.0 0.0 -23.9093 -23.9093 25 2 0 1265 0 0 0
k-x 0.0 0.0 -73.309 -73.309 52 15 0 4554 0 0 0
k-z 0.0 0.0 -41.1246 -41.1246 33 10 3 2132 0 0 0
l-m -23.8977 -13.8801 -194.61 -232.3879 62 14 14 8417 0 1 1
l-t -14.11 -10.6326 -158.609 -183.3516 51 0 12 6104 0 1 3
m-t 0.0 0.0 -23.4321 -23.4321 26 0 0 1441 0 1 2
o-u -2.3669 9.9734 -105.729 -98.1225 62 2 12 4976 0 22 13
u-v -31.9125 -10.2458 -142.502 -184.6603 65 10 4 6171 1 13 8
x-z 0.0 0.0 -63.8848 -63.8848 40 12 0 3780 0 0 0