2AV5

crystal structure of pyrococcus furiosus pop5, an archaeal ribonuclease p protein

• Total interactions analyzed: 10
• Total true interactions: 5
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 40
  • Norm. En. per Res.: -5.0918
• Hub Node: C(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-52.6789	-50.2822	-87.8485	-190.8096	40	4	4	3509	4	4	8
B-E	-2.264	-23.998	-55.4389	-81.7009	41	6	0	2857	0	33	16
C-D	-55.305	-52.3254	-96.0409	-203.6713	40	4	4	3632	4	5	8
C-E	0.0	-21.7298	-119.398	-141.1278	63	2	4	5330	2	4	10
D-E	-3.3518	-3.0616	-25.6235	-32.0369	34	0	2	1748	0	10	10

Interface residues

• A-B: ALA41A, ALA41B, ALA52A, ALA52B, ARG44A, ARG44B, ASP79A, ASP79B, CYS42A, CYS42B, GLU48A, GLU48B, GLY47A, GLY47B, GLY50A, GLY50B, HIS76A, HIS76B, LEU43A, LEU43B, LEU46A, LEU46B, LEU49A, LEU49B, LEU86A, LEU86B, LYS53A, LYS53B, PHE82A, PHE82B, SER83A, SER83B, THR45A, THR45B, THR51A, THR51B, TYR78A, TYR78B, VAL80A, VAL80B
• B-E: ARG120E, ARG71E, ASN27B, ASN30B, ASN91B, ASN93B, ASP32B, ASP32E, ASP62E, ASP89B, GLN28B, GLN66B, GLU26B, GLU33B, GLU36B, GLU63B, GLU63E, GLY92B, ILE106E, ILE34B, ILE59E, ILE69E, ILE90B, LEU58E, LYS110E, LYS15E, LYS16E, LYS31B, LYS31E, LYS35E, LYS55E, LYS60E, LYS94B, PHE29B, PHE61B, PHE61E, SER25B, THR64B, TRP119E, TRP57E, TYR18E
• C-D: ALA41C, ALA41D, ALA52C, ALA52D, ARG44C, ARG44D, ASP79C, ASP79D, CYS42C, CYS42D, GLU48C, GLU48D, GLY47C, GLY47D, GLY50C, GLY50D, HIS76C, HIS76D, LEU43C, LEU43D, LEU46C, LEU46D, LEU49C, LEU49D, LEU86C, LEU86D, LYS53C, LYS53D, PHE82C, PHE82D, SER83C, SER83D, THR45C, THR45D, THR51C, THR51D, TYR78C, TYR78D, VAL80C, VAL80D
• C-E: ALA20E, ARG108C, ARG108E, ARG17C, ARG17E, ARG74C, ARG74E, ASN75C, ASN75E, ASP79C, ASP79E, GLY101C, GLY101E, HIS76C, HIS76E, ILE19C, ILE19E, ILE24C, ILE24E, ILE81C, ILE81E, ILE96C, ILE96E, ILE97C, ILE97E, LEU100C, LEU100E, LEU46C, LEU46E, LEU84C, LEU84E, LEU86C, LEU86E, LYS112C, LYS112E, LYS98C, LYS98E, PHE113C, PHE113E, PHE82C, PHE82E, SER103C, SER103E, SER83C, SER83E, SER88C, SER88E, THR45C, THR45E, THR85C, THR85E, TYR78C, TYR78E, VAL102C, VAL102E, VAL77C, VAL77E, VAL80C, VAL80E, VAL87C, VAL87E, VAL99C, VAL99E
• D-E: ALA52D, ALA54D, ALA95E, ARG71D, ASN27E, ASN75D, ASP73D, GLN28E, GLN66E, GLU26E, GLU48D, GLY50D, HIS76D, ILE24E, ILE96E, ILE97E, LEU100E, LEU49D, LYS15D, LYS16D, LYS22E, LYS53D, LYS55D, LYS94E, LYS98E, PHE117E, SER25E, THR51D, THR64E, THR65E, THR85E, TRP39D, TRP57D, VAL23E