2AOJ

crystal structure analysis of hiv-1 protease with a substrate analog p6-pr

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 118
  • Norm. En. per Res.: -6.259
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-158.1257	-0.324	-580.117	-738.5667	118	29	21	21182	4	13	9
A-C	-67.2326	0.0	-97.2998	-164.5324	41	9	2	4161	0	0	0
B-C	-50.0274	0.0	-101.405	-151.4324	39	9	2	4027	0	0	0

Interface residues

• A-B: ALA128B, ALA167B, ALA195B, ALA28A, ALA67A, ALA95A, ARG108B, ARG187B, ARG87A, ARG8A, ASN183B, ASN188B, ASN198B, ASN83A, ASN88A, ASN98A, ASP125B, ASP129B, ASP130B, ASP25A, ASP29A, ASP30A, GLN102B, GLN192B, GLN2A, GLN92A, GLY127B, GLY148B, GLY149B, GLY151B, GLY152B, GLY168B, GLY178B, GLY186B, GLY194B, GLY27A, GLY48A, GLY49A, GLY51A, GLY52A, GLY68A, GLY78A, GLY86A, GLY94A, HIS169B, HIS69A, ILE103B, ILE133B, ILE147B, ILE150B, ILE154B, ILE166B, ILE184B, ILE185B, ILE193B, ILE33A, ILE3A, ILE47A, ILE50A, ILE54A, ILE66A, ILE84A, ILE85A, ILE93A, LEU105B, LEU10A, LEU110B, LEU123B, LEU124B, LEU176B, LEU189B, LEU190B, LEU197B, LEU23A, LEU24A, LEU5A, LEU76A, LEU89A, LEU90A, LEU97A, LYS107B, LYS55A, LYS7A, PHE153B, PHE199B, PHE53A, PHE99A, PRO101B, PRO109B, PRO179B, PRO181B, PRO1A, PRO79A, PRO81A, PRO9A, THR104B, THR126B, THR12A, THR131B, THR180B, THR191B, THR196B, THR26A, THR31A, THR4A, THR80A, THR91A, THR96A, TRP106B, TRP6A, VAL111B, VAL11A, VAL132B, VAL156B, VAL182B, VAL32A, VAL56A, VAL82A
• A-C: ALA28A, ALA310C, ARG87A, ARG8A, ASN304C, ASN83A, ASP25A, ASP29A, ASP30A, GLN307C, GLN58A, GLY27A, GLY48A, GLY49A, GLY51A, GLY52A, GLY86A, ILE308C, ILE47A, ILE50A, ILE54A, ILE84A, ILE85A, LEU23A, LEU76A, LYS43A, LYS45A, MET46A, PHE303C, PHE53A, PRO306C, PRO81A, SER302C, THR26A, THR309C, THR31A, THR80A, VAL301C, VAL32A, VAL56A, VAL82A
• B-C: ALA128B, ALA310C, ALA311C, ARG108B, ARG187B, ASN304C, ASP125B, ASP129B, ASP130B, GLN158B, GLN307C, GLY127B, GLY148B, GLY149B, GLY151B, GLY152B, GLY186B, ILE147B, ILE150B, ILE154B, ILE184B, ILE308C, LEU123B, LEU176B, LYS145B, MET146B, PHE153B, PHE303C, PRO181B, PRO306C, SER302C, THR126B, THR131B, THR180B, THR309C, VAL132B, VAL156B, VAL182B, VAL301C