1ZS4

structure of bacteriophage lambda cii protein in complex with dna

• Total interactions analyzed: 15
• Total true interactions: 6
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 123
  • Norm. En. per Res.: -3.2873
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-14.4633	-21.5159	-368.353	-404.3321	123	4	22	16469	1	26	28
A-C	0.0	0.0	-47.4171	-47.4171	28	0	10	2501	0	4	1
A-D	-2.4212	0.0	-47.6357	-50.0569	22	1	3	1882	0	2	2
B-C	-35.5952	-13.6431	-194.319	-243.5573	80	10	8	8061	2	29	25
B-D	0.0	0.0	-12.8518	-12.8518	16	0	3	777	0	0	1
C-D	-26.3612	-7.3504	-375.087	-408.7986	125	5	23	16424	0	25	26

Interface residues

• A-B: ALA10B, ALA16A, ALA16B, ALA22A, ALA22B, ALA30A, ALA30B, ALA32A, ALA32B, ALA56A, ALA56B, ALA68A, ALA68B, ALA71A, ALA71B, ALA75A, ALA75B, ALA76A, ALA76B, ARG12A, ARG69A, ARG69B, ARG72A, ARG72B, ARG7B, ASN19A, ASN19B, ASN80A, ASP46A, ASP46B, ASP64A, ASP65A, ASP65B, ASP66A, ASP66B, GLN39A, GLN73A, GLN73B, GLU14A, GLU31A, GLU31B, GLU59A, GLU59B, GLU9A, GLY25A, GLY25B, GLY34A, GLY34B, GLY61A, GLY61B, ILE13A, ILE13B, ILE21A, ILE21B, ILE40A, ILE40B, ILE48A, ILE48B, ILE77A, ILE77B, LEU17A, LEU17B, LEU18A, LEU18B, LEU24A, LEU24B, LEU54A, LEU54B, LEU55A, LEU55B, LEU58A, LEU58B, LEU70A, LEU70B, LEU78A, LEU78B, LYS20A, LYS20B, LYS28A, LYS28B, LYS44A, LYS44B, LYS50A, LYS50B, LYS6A, LYS6B, LYS81B, MET23A, MET23B, MET53A, MET53B, MET67A, MET67B, PHE51A, PHE51B, PRO49A, PRO49B, SER15A, SER52A, SER52B, THR26A, THR29A, THR29B, THR79A, THR79B, TRP43A, TRP43B, TRP47A, TRP47B, TRP60A, TRP60B, VAL33A, VAL33B, VAL35A, VAL35B, VAL57A, VAL57B, VAL62A, VAL62B, VAL63A, VAL63B, VAL74A, VAL74B
• A-C: ALA68C, ALA71A, ALA71C, ALA75A, ALA75C, ALA76A, ALA76C, ARG12C, ARG69A, ARG69C, ARG72C, ASP64C, ASP65C, ASP66C, GLN73A, GLN73C, ILE77A, LEU70A, LEU70C, LEU78A, LEU78C, MET67A, MET67C, THR79A, VAL62A, VAL63C, VAL74A, VAL74C
• A-D: ALA68D, ALA71D, ALA75A, ALA75D, ALA76A, ALA76D, ARG69D, ARG72D, ASN80A, ASP64D, ASP66D, GLN73D, ILE77A, LEU70D, LEU78A, LEU78D, LYS81A, MET67D, THR79A, VAL63D, VAL74A, VAL74D
• B-C: ALA16B, ALA16C, ALA22B, ALA22C, ALA68B, ALA68C, ALA71B, ALA71C, ALA75B, ALA75C, ALA76B, ALA76C, ARG12B, ARG42B, ARG45B, ARG69B, ARG69C, ARG72B, ARG72C, ASN19B, ASN19C, ASP36B, ASP46B, ASP64B, ASP64C, ASP65C, ASP66B, ASP66C, GLN39B, GLN73B, GLN73C, GLU14B, GLU14C, GLU27B, GLU27C, GLY25B, GLY25C, ILE13B, ILE21B, ILE21C, ILE40B, ILE48B, ILE77B, ILE77C, LEU11B, LEU17B, LEU17C, LEU18B, LEU18C, LEU24B, LEU24C, LEU70B, LEU70C, LEU78B, LEU78C, LYS20B, LYS20C, LYS28C, LYS37B, LYS44B, LYS44C, LYS81C, MET23B, MET23C, MET67B, MET67C, SER15B, SER15C, SER38B, SER41B, THR26B, THR26C, THR29B, THR29C, THR79B, THR79C, TRP43B, VAL35B, VAL74B, VAL74C
• B-D: ALA71B, ALA71D, ALA75B, ALA75D, ALA76B, ASN80B, ILE77B, ILE77D, LEU70D, LEU78B, LEU78D, LYS81B, THR79B, THR79D, VAL74B, VAL74D
• C-D: ALA10C, ALA10D, ALA16C, ALA16D, ALA22C, ALA22D, ALA30C, ALA30D, ALA32C, ALA32D, ALA56C, ALA56D, ALA68C, ALA68D, ALA71C, ALA71D, ALA75C, ALA75D, ALA76C, ALA76D, ARG12C, ARG12D, ARG42C, ARG69C, ARG72C, ASN19C, ASN19D, ASN80C, ASP36D, ASP46C, ASP64C, ASP64D, ASP65C, ASP65D, ASP66C, ASP66D, GLN39C, GLN39D, GLN73C, GLN73D, GLU14C, GLU14D, GLU31C, GLU31D, GLU59C, GLU59D, GLU9C, GLY25C, GLY25D, GLY34C, GLY34D, GLY61C, GLY61D, ILE13C, ILE13D, ILE21C, ILE21D, ILE40C, ILE40D, ILE48C, ILE48D, ILE77C, ILE77D, LEU17C, LEU17D, LEU18C, LEU18D, LEU24C, LEU24D, LEU54C, LEU54D, LEU55C, LEU55D, LEU58C, LEU58D, LEU70C, LEU70D, LEU78C, LEU78D, LYS20C, LYS20D, LYS28C, LYS28D, LYS44C, LYS44D, LYS50C, LYS50D, LYS6C, LYS81C, MET23C, MET23D, MET53C, MET53D, MET67C, MET67D, PHE51C, PHE51D, PRO49C, PRO49D, SER15C, SER15D, SER52C, SER52D, THR26C, THR29C, THR29D, THR79C, TRP43C, TRP43D, TRP47C, TRP47D, TRP60C, TRP60D, VAL33C, VAL33D, VAL35C, VAL35D, VAL57C, VAL57D, VAL62C, VAL62D, VAL63C, VAL63D, VAL74C, VAL74D