1ZRT

rhodobacter capsulatus cytochrome bc1 complex with stigmatellin bound

• Total interactions analyzed: 15
• Total true interactions: 14
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 157
  • Norm. En. per Res.: -2.919
• Hub Node: C(5)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
C-D	-27.6734	-65.0523	-365.565	-458.2907	157	36	21	17378	3	34	37
C-E	-24.8981	0.6659	-71.8976	-96.1299	55	18	3	4056	1	4	4
C-P	-14.1856	13.7435	-253.602	-254.0441	151	50	4	12583	0	30	27
C-Q	0.0	-0.8214	-0.0687	-0.8901	4	0	0	15	0	2	4
C-R	-19.6246	14.5414	-246.216	-251.2992	123	25	4	11887	0	22	17
D-E	0.0	-6.6066	-77.9351	-84.5417	68	19	1	4623	0	15	15
D-P	0.0	-1.6558	-0.0422	-1.6979	4	0	0	10	0	2	4
D-Q	0.0	0.0	-0.0016	-0.0016	2	0	0	1	0	4	6
D-R	0.0	0.0	-2.0738	-2.0738	20	0	0	298	0	7	9
E-P	-27.8197	22.5939	-253.148	-258.3738	123	25	5	12335	0	22	17
E-Q	0.0	0.661	-4.5158	-3.8548	26	0	0	489	0	9	10
P-Q	-15.4627	-12.5955	-350.984	-379.0423	158	35	20	17412	3	35	38
P-R	-25.277	1.5588	-91.079	-114.7972	55	19	3	4087	1	4	4
Q-R	0.0	-7.581	-87.3985	-94.9795	71	20	2	4845	0	15	15

Interface residues

• C-D: ALA104D, ALA106D, ALA108D, ALA216D, ALA217D, ALA223D, ALA231D, ALA251D, ALA255C, ALA257C, ALA258D, ALA265C, ALA268C, ALA290C, ALA78C, ALA92C, ARG107D, ARG224D, ARG248D, ARG46D, ARG85C, ARG94C, ASN246D, ASN272C, ASN279C, ASN40C, ASN42C, ASN88C, ASP240C, ASP252C, ASP278C, ASP427C, ASP74C, ASP86C, ASP99D, GLN120D, GLN159D, GLN226D, GLN282C, GLU218D, GLU386C, GLU425C, GLU426C, GLU81C, GLY109D, GLY127D, GLY13D, GLY16D, GLY228D, GLY236D, GLY255D, GLY262C, GLY89C, GLY90C, HIS256D, HIS276C, HIS291C, HIS82C, ILE14D, ILE160D, ILE250C, ILE96C, LEU100D, LEU121D, LEU213D, LEU221D, LEU229D, LEU235D, LEU237D, LEU238D, LEU242C, LEU242D, LEU244D, LEU249D, LEU253C, LEU256C, LEU258C, LEU260C, LEU261C, LEU41C, LEU75C, LYS105D, LYS123D, LYS220D, LYS225D, LYS239C, LYS247D, LYS251C, LYS254D, LYS257D, LYS39C, LYS41D, MET103D, MET214D, MET227D, MET232D, MET234D, MET241D, MET270C, MET383C, MET40D, MET84C, MET87D, PHE110D, PHE15D, PHE244C, PHE248C, PHE254C, PHE263C, PHE264C, PHE428C, PHE42D, PHE53C, PHE77C, PHE88D, PRO219D, PRO243C, PRO246C, PRO252D, PRO271C, PRO277C, PRO38C, PRO44D, PRO98D, SER101D, SER111D, SER239D, SER79C, THR241C, THR245D, THR37C, THR47D, TRP215D, TRP245C, TRP250D, TRP43C, TRP91C, TYR243D, TYR247C, TYR253D, TYR269C, TYR280C, TYR389C, TYR95C, VAL102D, VAL222D, VAL230D, VAL233D, VAL240D, VAL249C, VAL259C, VAL266C, VAL267C, VAL281C, VAL43D, VAL80C, VAL87C
• C-E: ALA20E, ALA257C, ALA29E, ALA30E, ALA40E, ALA42E, ALA66C, ALA92C, ARG85C, ASN36E, ASN39E, ASN88C, ASP43E, ASP86C, GLN37E, GLY23E, GLY62C, GLY89C, GLY90C, HIS68C, HIS82C, ILE250C, ILE35E, ILE63C, ILE83C, ILE96C, LEU253C, LEU260C, LEU34E, LEU57C, LEU65C, LYS45E, MET38E, MET67C, MET93C, PHE264C, PHE53C, PRO246C, PRO33E, SER41E, THR19E, THR27E, THR61C, TRP245C, TRP32E, TRP91C, TYR16E, VAL249C, VAL26E, VAL31E, VAL44E, VAL56C, VAL60C, VAL64C, VAL87C
• C-P: ALA123C, ALA123P, ALA189C, ALA189P, ALA206C, ALA206P, ALA207C, ALA207P, ALA215C, ALA215P, ALA66C, ALA66P, ALA76P, ARG125C, ARG125P, ARG193C, ARG193P, ARG22C, ARG22P, ARG231C, ARG231P, ASN188C, ASN188P, ASN192C, ASN192P, ASP21C, ASP21P, ASP31C, ASP31P, ASP74C, ASP74P, GLU126C, GLU126P, GLY182C, GLY182P, GLY27C, GLY27P, GLY62C, GLY62P, HIS198C, HIS198P, HIS20C, HIS20P, HIS212C, HIS212P, HIS217C, HIS217P, HIS68C, HIS68P, HIS72C, HIS72P, HIS82C, HIS82P, ILE127C, ILE127P, ILE211C, ILE211P, ILE213C, ILE213P, ILE25C, ILE25P, ILE59C, ILE59P, ILE63C, ILE63P, ILE83C, ILE83P, LEU149C, LEU149P, LEU191C, LEU191P, LEU197C, LEU197P, LEU19C, LEU19P, LEU200C, LEU200P, LEU201C, LEU201P, LEU23C, LEU23P, LEU28C, LEU28P, LEU65C, LEU65P, LEU75C, LEU75P, LYS122C, LYS122P, MET145C, MET145P, MET67C, MET67P, PHE194C, PHE194P, PHE195C, PHE195P, PHE203C, PHE203P, PHE216C, PHE216P, PRO124C, PRO124P, PRO202C, PRO202P, PRO24C, PRO24P, PRO347C, PRO347P, PRO71C, PRO71P, SER196C, SER196P, SER79C, SER79P, THR128C, THR128P, THR190C, THR190P, THR218C, THR218P, THR219C, THR219P, THR70C, THR70P, TRP179C, TRP179P, TRP18C, TRP18P, TRP214C, TRP214P, TRP348C, TRP348P, TYR199C, TYR199P, TYR69C, TYR69P, VAL131C, VAL131P, VAL204C, VAL204P, VAL26C, VAL26P, VAL60C, VAL60P, VAL64C, VAL64P, VAL73C, VAL73P, VAL87C, VAL87P
• C-Q: ASP74C, ASP75Q, LEU286C, LYS74Q
• C-R: ALA159C, ALA168C, ALA171R, ALA178C, ALA185C, ALA189C, ALA290C, ALA303C, ALA307C, ALA309C, ALA310C, ALA328C, ALA40R, ALA42R, ALA46R, ARG173R, ARG193C, ARG306C, ARG68R, ARG94R, ASN188C, ASN192C, ASN284C, ASN36R, ASN39R, ASP147R, ASP187C, ASP311C, ASP327C, ASP390C, ASP43R, CYS133R, CYS138R, CYS153R, CYS155R, GLN153C, GLN177C, GLN37R, GLU386C, GLY131R, GLY137R, GLY142R, GLY157R, GLY158C, GLY164C, GLY167C, GLY169R, GLY182C, GLY183C, GLY332C, GLY69R, HIS135R, HIS156R, HIS159R, HIS291C, ILE162C, ILE176C, ILE292C, ILE35R, LEU136R, LEU165C, LEU180C, LEU181C, LEU197C, LEU286C, LEU305C, LEU34R, LEU63R, LYS168R, LYS329C, LYS45R, LYS66R, LYS70R, MET141R, MET154C, MET336C, MET38R, MET47R, PHE152R, PHE156C, PHE166C, PHE194C, PHE308C, PHE330C, PHE73R, PRO140R, PRO154R, PRO170R, PRO172R, PRO174C, PRO184C, PRO285C, PRO289C, PRO294C, PRO384C, PRO71R, SER158R, SER175C, SER196C, SER287C, SER41R, THR134R, THR160C, THR163C, THR190C, THR288C, THR385C, THR64R, TRP157C, TRP179C, TRP32R, TRP67R, TYR302C, TYR387C, VAL132R, VAL139R, VAL161C, VAL186C, VAL293C, VAL333C, VAL44R, VAL65R, VAL72R
• D-E: ALA18E, ALA20E, ALA21E, ALA231D, ALA29E, ALA30E, ALA42E, ALA46E, ALA48E, ARG11E, ARG12E, ARG248D, ARG46D, ARG62D, ARG80D, ASN246D, ASP13E, ASP43E, ASP50D, ASP75D, GLU84D, GLY236D, GLY23E, GLY28E, HIS17E, ILE50E, LEU15E, LEU235D, LEU237D, LEU238D, LEU242D, LEU244D, LEU249D, LYS220D, LYS45E, LYS66E, LYS74D, LYS83D, MET227D, MET234D, MET241D, MET47E, MET87D, PHE14E, PHE51E, PRO33E, PRO44D, SER239D, SER41E, SER49E, SER76D, THR19E, THR22E, THR245D, THR27E, THR47D, THR85D, TRP67E, TYR16E, TYR243D, VAL230D, VAL233D, VAL240D, VAL24E, VAL25E, VAL26E, VAL44E, VAL65E
• D-P: ASP74P, ASP75D, LEU286P, LYS74D
• D-Q: ASP75D, LYS41Q
• D-R: ASP143R, ASP147R, ASP150D, ASP165D, GLU58R, GLY146R, GLY149R, GLY161D, ILE160D, LYS144R, LYS168D, LYS174D, LYS80R, MET141R, PHE148R, PRO164D, SER145R, THR166D, THR61R, TYR152D
• E-P: ALA159P, ALA168P, ALA171E, ALA178P, ALA185P, ALA189P, ALA290P, ALA303P, ALA307P, ALA309P, ALA310P, ALA328P, ALA40E, ALA42E, ALA46E, ARG173E, ARG193P, ARG306P, ARG68E, ARG94E, ASN188P, ASN192P, ASN284P, ASN36E, ASN39E, ASP147E, ASP187P, ASP311P, ASP327P, ASP390P, ASP43E, CYS133E, CYS138E, CYS153E, CYS155E, GLN153P, GLN177P, GLN37E, GLU386P, GLY131E, GLY137E, GLY142E, GLY157E, GLY158P, GLY164P, GLY167P, GLY169E, GLY182P, GLY183P, GLY332P, GLY69E, HIS135E, HIS156E, HIS159E, HIS291P, ILE162P, ILE176P, ILE292P, ILE35E, LEU136E, LEU165P, LEU180P, LEU181P, LEU197P, LEU286P, LEU305P, LEU34E, LEU63E, LYS168E, LYS329P, LYS45E, LYS66E, LYS70E, MET141E, MET154P, MET336P, MET38E, MET47E, PHE152E, PHE156P, PHE166P, PHE194P, PHE308P, PHE330P, PHE73E, PRO140E, PRO154E, PRO170E, PRO172E, PRO174P, PRO184P, PRO285P, PRO289P, PRO294P, PRO384P, PRO71E, SER158E, SER175P, SER196P, SER287P, SER41E, THR134E, THR160P, THR163P, THR190P, THR288P, THR385P, THR64E, TRP157P, TRP179P, TRP32E, TRP67E, TYR302P, TYR387P, VAL132E, VAL139E, VAL161P, VAL186P, VAL293P, VAL333P, VAL44E, VAL65E, VAL72E
• E-Q: ASP143E, ASP147E, ASP150Q, ASP165Q, CYS167Q, GLU58E, GLY146E, GLY149E, GLY150E, GLY161Q, GLY172Q, ILE149Q, ILE160Q, LYS144E, LYS168Q, LYS174Q, LYS80E, MET141E, PHE148E, PHE152E, PRO164Q, SER145E, THR166Q, THR61E, TYR152Q, VAL173Q
• P-Q: ALA104Q, ALA106Q, ALA108Q, ALA216Q, ALA217Q, ALA223Q, ALA231Q, ALA251Q, ALA255P, ALA257P, ALA258Q, ALA265P, ALA268P, ALA290P, ALA78P, ALA92P, ARG107Q, ARG224Q, ARG248Q, ARG46Q, ARG85P, ARG94P, ASN246Q, ASN272P, ASN279P, ASN40P, ASN42P, ASN88P, ASP240P, ASP252P, ASP278P, ASP427P, ASP74P, ASP86P, ASP99Q, GLN120Q, GLN159Q, GLN226Q, GLN282P, GLU218Q, GLU386P, GLU425P, GLU426P, GLU81P, GLY109Q, GLY127Q, GLY13Q, GLY16Q, GLY228Q, GLY236Q, GLY255Q, GLY262P, GLY89P, GLY90P, HIS256Q, HIS276P, HIS291P, HIS82P, ILE14Q, ILE160Q, ILE250P, ILE96P, LEU100Q, LEU121Q, LEU213Q, LEU221Q, LEU229Q, LEU235Q, LEU237Q, LEU238Q, LEU242P, LEU242Q, LEU244Q, LEU249Q, LEU253P, LEU256P, LEU258P, LEU260P, LEU261P, LEU41P, LEU75P, LYS105Q, LYS123Q, LYS220Q, LYS225Q, LYS239P, LYS247Q, LYS251P, LYS254Q, LYS257Q, LYS39P, LYS41Q, MET103Q, MET227Q, MET232Q, MET234Q, MET241Q, MET270P, MET383P, MET40Q, MET84P, MET87Q, MET93P, PHE110Q, PHE122Q, PHE15Q, PHE244P, PHE248P, PHE254P, PHE263P, PHE264P, PHE428P, PHE42Q, PHE53P, PHE77P, PRO219Q, PRO243P, PRO246P, PRO252Q, PRO271P, PRO277P, PRO384P, PRO38P, PRO44Q, PRO98Q, SER101Q, SER111Q, SER239Q, SER79P, THR241P, THR245Q, THR37P, THR47Q, TRP215Q, TRP245P, TRP250Q, TRP43P, TRP91P, TYR243Q, TYR247P, TYR253Q, TYR269P, TYR280P, TYR389P, TYR95P, VAL102Q, VAL222Q, VAL230Q, VAL233Q, VAL240Q, VAL249P, VAL259P, VAL266P, VAL267P, VAL281P, VAL43Q, VAL80P, VAL87P
• P-R: ALA20R, ALA257P, ALA29R, ALA30R, ALA40R, ALA42R, ALA66P, ALA92P, ARG85P, ASN36R, ASN39R, ASN88P, ASP43R, ASP86P, GLN37R, GLY23R, GLY62P, GLY89P, GLY90P, HIS68P, HIS82P, ILE250P, ILE35R, ILE63P, ILE83P, ILE96P, LEU253P, LEU260P, LEU34R, LEU57P, LEU65P, LYS45R, MET38R, MET67P, MET93P, PHE264P, PHE53P, PRO246P, PRO33R, SER41R, THR19R, THR27R, THR61P, TRP245P, TRP32R, TRP91P, TYR16R, VAL249P, VAL26R, VAL31R, VAL44R, VAL56P, VAL60P, VAL64P, VAL87P
• Q-R: ALA18R, ALA20R, ALA21R, ALA231Q, ALA29R, ALA30R, ALA42R, ALA46R, ALA48R, ALA49Q, ARG11R, ARG12R, ARG248Q, ARG46Q, ARG62Q, ARG80Q, ASN246Q, ASP13R, ASP43R, ASP50Q, ASP75Q, ASP81Q, ASP86Q, GLU84Q, GLY236Q, GLY23R, GLY28R, HIS17R, ILE50R, LEU15R, LEU235Q, LEU237Q, LEU238Q, LEU242Q, LEU244Q, LEU249Q, LYS220Q, LYS45R, LYS66R, LYS74Q, LYS83Q, MET227Q, MET234Q, MET241Q, MET47R, MET87Q, PHE14R, PHE51R, PRO33R, PRO44Q, SER239Q, SER41R, SER49R, SER76Q, THR19R, THR22R, THR245Q, THR27R, THR47Q, THR85Q, TRP67R, TYR16R, TYR243Q, VAL230Q, VAL233Q, VAL240Q, VAL24R, VAL25R, VAL26R, VAL44R, VAL65R