1Z0K

structure of gtp-bound rab4q67l gtpase in complex with the central rab binding domain of rabenosyn-5

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 97
  • Norm. En. per Res.: -3.9637
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-84.553	-38.6944	-240.522	-363.7694	93	17	5	10162	4	24	12
A-C	-55.293	-27.331	-190.232	-272.856	74	8	5	7853	2	27	18
B-C	-6.427	-9.2138	-15.8038	-31.4446	27	4	0	1379	2	15	24
C-D	-81.5529	-58.2515	-244.677	-384.4814	97	15	4	10354	6	23	13

Interface residues

• A-B: ALA473B, ALA65A, ARG478B, ARG483B, ARG69A, ARG71A, ARG79A, ASN38A, ASN465B, ASN488B, ASP36A, ASP455B, ASP457B, ASP480B, ASP63A, CYS23A, GLN27A, GLN450B, GLN452B, GLN461B, GLN462B, GLN486B, GLN491B, GLN499B, GLN60A, GLU30A, GLU441B, GLU44A, GLU454B, GLU481B, GLU487B, GLU495B, GLU68A, GLY42A, GLY442B, GLY448B, GLY46A, HIS26A, HIS39A, HIS464B, ILE29A, ILE41A, ILE463B, ILE466B, ILE470B, ILE49A, ILE50A, ILE61A, LEU24A, LEU25A, LEU444B, LEU446B, LEU459B, LEU460B, LEU485B, LEU489B, LEU492B, LEU59A, LEU67A, LEU8A, LYS10A, LYS31A, LYS32A, LYS34A, LYS48A, LYS58A, MET479B, PHE28A, PHE45A, PHE469B, PHE70A, PRO445B, PRO458B, SER22A, SER447B, SER453B, SER456B, SER47A, SER72A, SER76A, THR40A, THR484B, THR4A, THR64A, THR74A, TRP443B, TRP62A, TYR496B, TYR5A, TYR77A, VAL43A, VAL482B, VAL73A
• A-C: ALA136C, ALA140C, ALA161C, ALA166A, ALA81A, ALA82A, ARG129C, ARG138C, ARG167A, ARG167C, ARG79A, ASN113A, ASN143C, ASN171A, ASN171C, ASP126C, ASP157C, ASP6A, CYS165A, CYS165C, GLN112A, GLN141C, GLN164C, GLN60A, GLU135C, GLU142C, GLU144C, GLU149C, GLU156C, GLU159C, GLU160C, GLY53A, GLY54A, GLY80A, GLY83A, ILE114A, ILE116C, ILE117C, ILE169A, ILE49A, LEU118C, LEU134C, LEU145C, LEU148C, LEU170A, LEU8A, LYS10A, LYS123C, LYS168A, LYS168C, LYS172A, LYS55A, LYS58A, MET146A, MET146C, PHE11A, PHE133C, PHE139C, PHE147C, PHE7A, PHE9A, SER111A, SER137C, THR132C, THR150C, THR4A, TYR56A, TYR5A, VAL115A, VAL115C, VAL163C, VAL52A, VAL52C, VAL57A
• B-C: ALA161C, ARG167C, ARG483B, ARG490B, ASP124C, ASP157C, ASP480B, GLN164C, GLN27C, GLN491B, GLU156C, GLU159C, GLU160C, GLU481B, GLU487B, GLY155C, LEU153C, LYS123C, LYS31C, LYS48C, MET479B, PHE28C, SER151C, THR154C, THR484B, VAL158C, VAL163C
• C-D: ALA473D, ALA65C, ARG478D, ARG483D, ARG69C, ARG71C, ARG75C, ARG79C, ASN38C, ASN465D, ASN488D, ASP35C, ASP36C, ASP455D, ASP457D, ASP480D, ASP494D, ASP63C, GLN27C, GLN450D, GLN452D, GLN461D, GLN462D, GLN486D, GLN491D, GLN499D, GLN60C, GLU30C, GLU441D, GLU44C, GLU454D, GLU481D, GLU487D, GLU495D, GLU68C, GLY42C, GLY442D, GLY448D, GLY451D, GLY46C, GLY80C, HIS26C, ILE29C, ILE41C, ILE463D, ILE466D, ILE470D, ILE49C, ILE50C, ILE61C, LEU24C, LEU25C, LEU444D, LEU446D, LEU459D, LEU460D, LEU485D, LEU489D, LEU492D, LEU59C, LEU67C, LEU8C, LYS10C, LYS31C, LYS32C, LYS34C, LYS48C, LYS58C, MET479D, PHE11C, PHE28C, PHE45C, PHE469D, PHE70C, PHE9C, PRO445D, PRO458D, SER22C, SER37C, SER447D, SER453D, SER456D, SER47C, SER72C, SER76C, THR40C, THR484D, THR64C, THR74C, TRP443D, TRP62C, TYR5C, TYR77C, TYR78C, VAL43C, VAL482D, VAL73C