1YTU

structural basis for 5'-end-specific recognition of the guide rna strand by the a. fulgidus piwi protein

• Total interactions analyzed: 15
• Total true interactions: 1
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 59
  • Norm. En. per Res.: -3.0994
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-26.7472	9.2607	-165.376	-182.8625	59	7	1	5880	0	11	7

Interface residues

• A-B: ARG307B, ARG322A, ASN305B, ASN306B, ASP303A, ASP303B, GLU294A, GLU338B, GLU3A, GLU3B, GLY302A, GLY302B, HIS296A, HIS296B, HIS309B, ILE343A, ILE343B, ILE6B, LEU318A, LEU318B, LEU324A, LEU324B, LEU337B, LYS317A, LYS317B, LYS344A, LYS344B, LYS5B, PHE298A, PHE298B, PHE308B, PRO297A, PRO297B, PRO304B, PRO310A, PRO310B, PRO330B, PRO342A, PRO342B, PRO345A, PRO345B, SER319A, SER347A, THR295A, THR295B, THR314B, THR326B, THR341B, TRP299A, TRP299B, TYR323B, TYR331B, TYR4A, TYR4B, VAL300A, VAL300B, VAL316A, VAL316B, VAL340B