1YP3

crystal structure of potato tuber adp-glucose pyrophosphorylase in complex with atp

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 147
  • Norm. En. per Res.: -2.8643
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-120.0972	45.9443	-346.905	-421.0579	147	26	8	14876	0	45	37
A-C	0.0	0.0	732.501	732.501	28	8	0	1560	0	10	14
A-D	-17.4404	-1.2476	-180.891	-199.579	93	11	2	7502	0	38	24
B-C	-6.0809	-18.9482	-205.239	-230.2681	98	12	4	8428	0	37	26
B-D	0.0	22.9516	-14.1937	8.7579	48	0	0	1101	0	14	16
C-D	-127.2543	64.6351	-340.195	-402.8141	150	24	9	15096	1	46	37

Interface residues

• A-B: ALA326A, ALA326B, ALA376A, ALA50A, ALA50B, ALA88A, ALA88B, ARG149B, ARG307A, ARG307B, ARG316A, ARG316B, ARG352A, ARG352B, ARG378A, ARG378B, ARG87B, ASN341A, ASN341B, ASN51A, ASN51B, ASP306A, ASP306B, ASP325A, ASP325B, ASP327A, ASP327B, ASP330A, ASP330B, ASP370A, ASP370B, ASP375A, ASP375B, ASP377A, ASP377B, CYS337A, CYS337B, CYS342A, CYS342B, GLN314A, GLN314B, GLU335A, GLU335B, GLU357A, GLU373A, GLY293B, GLY334A, GLY334B, GLY336A, GLY336B, GLY350A, GLY350B, GLY49A, GLY49B, HIS345A, HIS345B, HIS346A, HIS346B, ILE294A, ILE294B, ILE311A, ILE311B, ILE333A, ILE333B, ILE339A, ILE339B, ILE344A, ILE344B, LEU318A, LEU318B, LEU324A, LEU324B, LEU351A, LEU351B, LEU48A, LEU48B, LEU63B, LYS296A, LYS296B, LYS297A, LYS297B, LYS322A, LYS322B, LYS340A, LYS340B, LYS343A, LYS343B, MET323A, MET323B, PHE302A, PHE302B, PHE304A, PHE304B, PRO298A, PRO298B, PRO300A, PRO300B, PRO310A, PRO310B, PRO315A, PRO315B, PRO319A, PRO319B, PRO320A, PRO320B, SER303A, SER303B, SER321A, SER321B, SER331A, SER331B, SER347A, SER347B, SER91B, THR295A, THR295B, THR313A, THR313B, THR329A, THR329B, THR374A, THR374B, TYR305A, TYR305B, TYR312A, TYR312B, TYR317A, TYR317B, TYR371A, TYR371B, TYR372A, TYR372B, TYR52A, TYR52B, TYR89A, TYR89B, VAL299A, VAL299B, VAL328A, VAL328B, VAL332A, VAL332B, VAL338B, VAL348A, VAL348B, VAL349A, VAL349B
• A-C: ALA309A, ARG19A, ARG19C, ARG307A, ARG307C, ASP14A, ASP14C, ASP16C, CYS12A, CYS12C, GLN10A, GLN10C, GLN157A, GLN157C, GLU161A, GLU161C, GLU99C, LEU13A, LEU13C, LYS154A, LYS154C, PRO15A, SER308A, SER308C, THR11A, THR11C, THR135A, TYR312A
• A-D: ALA106A, ALA106D, ALA107A, ALA107D, ALA42A, ALA42D, ALA79A, ALA79D, ARG125A, ARG125D, ARG41D, ARG83A, ARG83D, ARG87A, ARG87D, ASN77A, ASN77D, ASN82A, ASN82D, ASN98D, GLN108A, GLN108D, GLN109A, GLN109D, GLN118A, GLN126A, GLN126D, GLN314A, GLN75A, GLN75D, GLU103A, GLU103D, GLU112A, GLU112D, GLU132A, GLU132D, GLU133A, GLU133D, GLU99A, GLU99D, GLY100A, GLY100D, HIS134A, HIS134D, LEU105A, LEU105D, LEU128D, LEU130A, LEU130D, LEU22A, LEU22D, LEU81A, LEU81D, LEU85A, LEU85D, LYS40A, LYS40D, LYS441A, LYS69A, LYS69D, PHE101A, PHE101D, PHE131A, PHE131D, PHE76A, PHE76D, PRO111A, PRO111D, PRO315A, SER110A, SER110D, SER78A, SER78D, SER80A, SER80D, SER86A, SER86D, THR135A, THR135D, THR74A, TRP116A, TRP129A, TRP129D, TYR127A, TYR127D, TYR317A, TYR71A, TYR71D, VAL102A, VAL102D, VAL104A, VAL104D, VAL136D
• B-C: ALA106B, ALA106C, ALA107B, ALA107C, ALA123C, ALA42B, ALA79B, ALA79C, ALA90B, ALA90C, ARG125B, ARG125C, ARG245B, ARG41B, ARG83B, ARG83C, ARG87B, ARG87C, ASN77B, ASN77C, ASN82B, ASN82C, ASN92B, ASN98B, GLN108B, GLN108C, GLN109B, GLN109C, GLN118C, GLN126B, GLN126C, GLN314B, GLN75B, GLN75C, GLU103B, GLU103C, GLU112B, GLU112C, GLU132B, GLU132C, GLU133B, GLU133C, GLU99B, GLU99C, GLY100B, GLY100C, HIS134B, HIS134C, ILE70B, LEU105B, LEU105C, LEU128B, LEU128C, LEU130B, LEU130C, LEU22B, LEU81B, LEU81C, LEU85C, LYS441C, LYS69B, LYS69C, PHE101B, PHE101C, PHE131B, PHE131C, PHE76B, PHE76C, PRO111B, PRO111C, PRO315B, SER110B, SER110C, SER78B, SER78C, SER80B, SER80C, SER86B, SER86C, SER91B, SER91C, THR135C, THR74B, TRP116C, TRP129B, TRP129C, TYR127B, TYR127C, TYR317B, TYR317C, TYR71B, TYR71C, TYR89B, TYR89C, VAL102B, VAL102C, VAL104B, VAL104C
• B-D: ALA309B, ALA309D, ALA88B, ALA88D, ARG19B, ARG19D, ARG307D, ASN64B, ASN64D, ASN66B, ASN66D, ASN92B, ASN98B, ASN98D, ASP14B, ASP14D, ASP151B, ASP151D, ASP16B, ASP16D, CYS12B, GLN157D, GLU153B, GLU153D, GLU99B, GLU99D, LEU13B, LEU13D, LEU63B, LEU63D, LYS154B, LYS154D, PRO15D, PRO310B, PRO310D, SER18B, SER18D, SER308B, SER308D, SER65B, SER65D, SER91B, THR11B, THR135B, TYR312B, TYR312D, TYR89B, TYR89D
• C-D: ALA326C, ALA326D, ALA376D, ALA50C, ALA50D, ALA88C, ALA88D, ARG149D, ARG307C, ARG307D, ARG316C, ARG316D, ARG352C, ARG352D, ARG378D, ARG87C, ARG87D, ASN341C, ASN341D, ASN51C, ASN51D, ASP306C, ASP306D, ASP325C, ASP325D, ASP327C, ASP327D, ASP330C, ASP330D, ASP370C, ASP370D, ASP375C, ASP375D, ASP377C, ASP377D, CYS337C, CYS337D, CYS342C, CYS342D, GLN314C, GLN314D, GLU335C, GLU335D, GLU373C, GLU373D, GLY293C, GLY334C, GLY334D, GLY336C, GLY336D, GLY350C, GLY350D, GLY49C, GLY49D, HIS345C, HIS345D, HIS346C, HIS346D, ILE294C, ILE294D, ILE311C, ILE311D, ILE333C, ILE333D, ILE339C, ILE339D, ILE344C, ILE344D, ILE389D, LEU292C, LEU318C, LEU318D, LEU324C, LEU324D, LEU351C, LEU351D, LEU48C, LEU48D, LYS296C, LYS296D, LYS297C, LYS297D, LYS322C, LYS322D, LYS340C, LYS340D, LYS343C, LYS343D, MET323C, MET323D, PHE302C, PHE302D, PHE304C, PHE304D, PRO298C, PRO298D, PRO300C, PRO300D, PRO310C, PRO310D, PRO315C, PRO315D, PRO319C, PRO319D, PRO320C, PRO320D, SER303C, SER303D, SER321C, SER321D, SER331C, SER331D, SER347C, SER347D, SER60C, SER60D, THR295C, THR295D, THR313C, THR313D, THR329C, THR329D, THR374C, THR374D, TYR305C, TYR305D, TYR312C, TYR312D, TYR317C, TYR317D, TYR371C, TYR371D, TYR372C, TYR372D, TYR52C, TYR52D, TYR89C, TYR89D, VAL299C, VAL299D, VAL328C, VAL328D, VAL332C, VAL332D, VAL338C, VAL338D, VAL348C, VAL348D, VAL349C, VAL349D