1YNR

crystal structure of the cytochrome c-552 from hydrogenobacter thermophilus at 2.0 resolution

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 43
  • Norm. En. per Res.: -3.7569
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-30.7898	-14.3002	-106.836	-151.9261	41	2	0	4283	2	15	20
A-C	-29.8273	1.47	-91.7295	-120.0868	42	5	0	3784	0	6	11
A-D	-9.1995	-0.2731	-59.8474	-69.32	35	2	0	2565	0	6	8
B-C	-9.9935	-0.5621	-59.0949	-69.6505	34	2	0	2364	0	6	8
C-D	-37.6221	-17.1138	-106.809	-161.5449	43	7	0	4568	3	15	21

Interface residues

• A-B: ALA12B, ALA18B, ALA5B, ALA67A, ALA69A, ASN63A, ASP15B, ASP66A, CYS10B, CYS13B, GLN3B, GLN62A, GLN7A, GLN7B, GLU2B, GLU68A, GLY22B, GLY44A, GLY49A, GLY9B, HIS14B, ILE46A, LEU16B, LEU4A, LYS17B, LYS19B, LYS20B, LYS45A, LYS47A, LYS48A, LYS6B, LYS8A, LYS8B, MET11B, MET59A, PRO60A, PRO61A, THR65A, TRP75B, VAL21B, VAL64A
• A-C: ALA12A, ALA12C, ALA5A, ALA5C, ASN1A, ASN1C, ASN63A, ASN63C, ASP15A, ASP15C, CYS10A, CYS10C, CYS13A, CYS13C, GLN3A, GLN3C, GLN62A, GLN62C, GLN7A, GLN7C, GLU2A, GLU2C, GLY9A, GLY9C, HIS14A, HIS14C, LEU16A, LEU16C, LEU4A, LEU4C, LYS20A, LYS20C, LYS6A, LYS6C, LYS8A, LYS8C, MET11A, MET11C, TYR25A, TYR25C, VAL21A, VAL21C
• A-D: ALA12A, ALA12D, ALA18A, ALA5D, ASN63D, ASP15A, CYS10D, CYS13A, GLN3D, GLN62D, GLN7D, GLU68D, GLY22A, GLY52A, GLY55A, GLY9D, LEU4D, LYS19A, LYS20A, LYS47D, LYS48D, LYS6D, LYS8D, MET59A, PRO23A, PRO58A, PRO60D, PRO61D, SER51A, SER56A, THR65D, TRP54A, VAL21A, VAL57A, VAL64D
• B-C: ALA12B, ALA12C, ALA18C, ALA5B, ASN63B, ASP15C, CYS10B, CYS13C, GLN3B, GLN62B, GLN7B, GLU68B, GLY22C, GLY52C, GLY55C, GLY9B, LEU4B, LYS19C, LYS20C, LYS47B, LYS6B, LYS8B, MET59C, PRO23C, PRO58C, PRO60B, PRO61B, SER51C, SER56C, THR65B, TRP54C, VAL21C, VAL57C, VAL64B
• C-D: ALA12D, ALA18D, ALA5D, ALA67C, ALA69C, ASN63C, ASP15D, ASP66C, CYS10D, CYS13D, GLN3D, GLN62C, GLN71C, GLN7C, GLN7D, GLU2D, GLU68C, GLY22D, GLY44C, GLY49C, GLY9D, HIS14D, ILE46C, LEU16D, LEU4C, LYS17D, LYS19D, LYS20D, LYS47C, LYS48C, LYS6D, LYS70C, LYS8C, LYS8D, MET11D, MET59C, PRO60C, PRO61C, THR65C, TRP75D, TYR25D, VAL21D, VAL64C