1YI2
crystal structure of erythromycin bound to the g2099a mutant 50s ribosomal subunit of haloarcula marismortui
Total interactions analyzed 465
Total true interactions 27
Strongest Interaction Chains A-Z
Int. Res. 113
Norm. En. per Res. -3.9404
Hub Node C(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-M 0.0 0.0 -0.5341 -0.5341 5 0 0 89 0 0 3
A-Z -105.2821 -28.5599 -311.424 -445.266 113 17 7 12791 3 28 23
B-J -13.2848 -22.6613 -48.6413 -84.5874 33 1 0 1933 1 3 0
B-K -7.3605 7.1884 -53.2276 -53.3996 39 4 0 2585 0 11 18
B-U -13.7294 7.2217 -43.7504 -50.2581 26 4 0 1346 0 5 5
C-L 0.0 0.0 -0.0038 -0.0038 2 0 0 5 0 0 3
C-O 0.0 5.6498 -40.7697 -35.1198 20 5 0 1689 0 7 6
C-T 0.0 0.0 -14.2744 -14.2744 14 0 0 811 0 3 10
C-Y 0.0 0.0 -0.0117 -0.0117 2 0 0 9 0 0 1
C-1 0.0 -11.7312 -43.9315 -55.6627 16 1 0 1431 1 6 6
D-N -16.2137 -0.7445 -42.2211 -59.1793 27 12 1 2158 0 13 20
E-J -10.7962 7.2024 -66.4839 -70.0776 26 5 1 2476 0 7 7
F-M -40.5027 -6.4842 -183.744 -230.7309 71 14 3 7932 4 23 26
H-Q 0.0 0.0 -0.044 -0.044 3 0 0 16 0 0 0
K-U -45.9275 -15.3217 -138.226 -199.4752 55 5 3 5764 1 17 19
L-M 0.0 0.0 -0.0186 -0.0186 2 0 0 14 0 0 1
L-O 0.0 0.0 -11.6245 -11.6245 25 0 0 929 0 5 5
L-Y 0.0 0.0 -12.167 -12.167 13 1 0 388 0 0 12
L-3 0.0 0.0 -4.5855 -4.5855 5 0 0 196 0 0 2
M-3 0.0 -2.3144 -33.15 -35.4644 20 1 0 1612 0 4 1
N-Q -9.92 5.0377 -97.9244 -102.8067 56 6 2 4972 0 11 16
R-X 0.0 0.0 -0.0864 -0.0864 3 0 0 7 0 0 8
R-2 0.0 0.0 -0.1082 -0.1082 4 0 0 34 0 0 1
S-V 0.0 -3.4446 -55.9043 -59.3489 39 3 4 2951 1 11 13
S-2 -16.4342 -4.7966 -46.4154 -67.6462 25 3 0 2284 1 19 11
T-2 0.0 0.0 -0.0505 -0.0505 2 0 0 9 0 2 2
1-2 0.0 -2.55 -44.1237 -46.6737 23 7 0 1724 0 19 15