1XMQ
crystal structure of t6a37-asllysuuu aaa-mrna bound to the decoding center
Total interactions analyzed 253
Total true interactions 27
Strongest Interaction Chains J-N
Int. Res. 54
Norm. En. per Res. -5.4526
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -7.2034 -7.2034 5 1 0 264 0 1 3
B-E 0.0 0.0 -0.0827 -0.0827 5 0 0 39 0 1 2
B-H -23.3341 -50.3056 -73.3194 -146.9592 33 16 0 2951 2 17 17
C-D 0.0 3.9315 -5.8003 -1.8688 7 1 0 335 0 0 8
C-E 0.0 -16.7688 -16.9354 -33.7042 18 0 0 786 1 4 3
C-J 0.0 8.0485 -87.4469 -79.3984 58 1 2 3447 0 15 25
C-N -21.0887 6.4224 -216.903 -231.5693 76 13 4 9117 0 18 41
D-E 0.0 -28.5308 -25.2531 -53.7839 40 1 0 1568 1 7 7
E-H -19.7351 -55.0357 -137.8 -212.5708 64 16 2 6452 2 40 42
F-O 0.0 0.0 -2.2449 -2.2449 4 0 0 160 0 3 2
F-R -81.5259 -37.2986 -281.481 -400.3055 89 29 8 10755 2 13 23
G-I 0.0 1.9241 -27.4091 -25.485 33 4 4 1965 0 5 8
G-K 0.0 0.0 -56.3535 -56.3535 26 2 3 2214 0 2 6
G-V 0.0 0.0 -0.0374 -0.0374 2 0 0 15 0 0 0
H-L 0.0 0.0 -7.9566 -7.9566 10 0 0 446 0 0 1
H-Q 0.0 4.17 -26.2728 -22.1028 14 3 0 1244 0 2 9
I-J 0.0 0.0 -30.7563 -30.7563 17 0 0 1331 0 10 16
I-M 0.0 1.1288 -4.6823 -3.5535 5 0 0 309 0 0 3
I-N -6.7118 0.0 -17.2322 -23.944 8 1 0 560 0 0 0
J-N -41.1015 -47.4509 -205.889 -294.4413 54 27 7 8837 5 14 36
K-R -24.7481 -11.4421 -83.2526 -119.4428 38 10 2 3773 1 15 19
L-Q -6.8453 0.0 -56.2421 -63.0874 20 0 4 2303 0 0 7
M-S 0.0 11.4127 -73.3531 -61.9404 45 5 0 3668 0 8 22
M-V 0.0 0.0 -1.8169 -1.8169 12 0 0 291 0 4 11
N-S 0.0 0.0 -0.0044 -0.0044 2 0 0 3 0 0 0
O-Q 0.0 -1.2122 -0.4883 -1.7005 9 0 0 112 0 6 6
S-V 0.0 0.0 -0.1961 -0.1961 2 0 0 68 0 0 0