1XMO
crystal structure of mnm5u34t6a37-trnalysuuu complexed with aag-mrna in the decoding center
Total interactions analyzed 253
Total true interactions 27
Strongest Interaction Chains J-N
Int. Res. 54
Norm. En. per Res. -5.8623
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -5.227 -5.227 7 1 0 274 0 3 4
B-E 0.0 0.0 -0.0127 -0.0127 5 0 0 15 0 0 2
B-H -18.232 -39.3558 -66.0754 -123.6632 32 6 0 2759 2 17 18
C-D 0.0 6.9759 -9.5396 -2.5637 7 1 0 429 0 0 7
C-E -6.6496 -19.446 -12.5296 -38.6252 19 1 0 596 2 3 4
C-J 0.0 6.7844 -88.7847 -82.0003 55 3 2 3484 0 15 26
C-N -17.2291 6.5455 -209.107 -219.7906 73 15 3 8876 0 20 39
D-E 0.0 -29.3217 -34.5743 -63.8959 37 0 0 1943 2 5 8
E-H -39.5478 -39.6575 -137.287 -216.4923 63 17 2 6608 3 42 41
F-O 0.0 0.0 -4.3059 -4.3059 4 0 0 203 0 2 3
F-R -67.3236 -36.7394 -277.108 -381.171 86 30 8 10585 0 13 25
G-I 0.0 2.0607 -29.813 -27.7523 34 0 4 1951 0 6 9
G-K 0.0 0.0 -58.3243 -58.3243 29 6 4 2520 0 2 6
G-V 0.0 0.0 -0.0439 -0.0439 2 0 0 17 0 1 0
H-L 0.0 0.0 -7.7087 -7.7087 10 1 0 455 0 0 1
H-Q 0.0 3.1777 -25.0293 -21.8516 15 3 0 1200 0 2 9
I-J 0.0 0.0 -5.8406 -5.8406 21 10 0 1242 0 9 16
I-M 0.0 2.5757 2.2613 4.837 6 3 0 329 0 0 3
I-N 0.0 0.0 -16.3119 -16.3119 8 0 0 575 0 0 0
J-N -40.0113 -41.1651 -235.39 -316.5664 54 18 5 8843 4 14 37
K-R -15.7717 -14.8132 -80.2139 -110.7988 37 14 2 3643 1 14 17
L-Q -8.0156 0.0 -52.4702 -60.4858 21 3 4 2332 0 0 8
M-S 0.0 24.2376 -72.7047 -48.4671 45 12 0 3638 1 9 22
M-V 0.0 0.0 -2.2828 -2.2828 11 0 0 300 0 5 9
N-S 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 0 0
O-Q 0.0 0.0 -0.4121 -0.4121 11 0 0 98 0 6 5
S-V 0.0 0.0 -0.0313 -0.0313 2 0 0 25 0 0 0