1X8D

crystal structure of e. coli yiil protein containing l- rhamnose

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 125
  • Norm. En. per Res.: -5.888
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-199.421	-1.6799	-534.894	-735.9949	125	28	33	20289	0	24	13
A-C	-5.9144	-8.1209	-69.0178	-83.053	32	2	0	2972	0	8	17
A-D	0.0	7.3509	-0.5284	6.8225	11	0	0	114	0	2	1
B-C	0.0	7.4556	-0.5775	6.8781	12	0	0	117	0	2	1
B-D	-10.6013	-8.3035	-71.8377	-90.7425	33	2	0	3044	0	10	17
C-D	-180.2723	-0.7143	-564.589	-745.5756	127	37	29	20704	0	24	14

Interface residues

• A-B: ALA31A, ALA31B, ALA38A, ALA38B, ALA42A, ALA42B, ALA48A, ALA48B, ALA54A, ALA54B, ALA5A, ALA5B, ARG20A, ARG20B, ARG21A, ARG21B, ARG3A, ARG3B, ARG49A, ARG49B, ASN23A, ASN23B, ASN40A, ASN40B, ASN50A, ASN50B, ASP46A, ASP46B, GLN19A, GLN19B, GLN98A, GLN98B, GLN9A, GLN9B, GLU16A, GLU16B, GLU30A, GLU30B, GLU57A, GLU57B, GLU96A, GLU96B, GLU99A, GLU99B, HIS15A, HIS15B, HIS22A, HIS22B, HIS39A, HIS39B, ILE25A, ILE25B, ILE2A, ILE43A, ILE43B, LEU103A, LEU103B, LEU29A, LEU29B, LEU33A, LEU33B, LEU45A, LEU45B, LEU51A, LEU51B, LEU52A, LEU52B, LEU97A, LEU97B, LYS34A, LYS34B, LYS47A, LYS47B, LYS4A, LYS4B, MET1A, MET1B, MET55A, MET55B, MET8A, MET8B, PHE101A, PHE101B, PHE53A, PHE53B, PHE6A, PHE6B, PRO104A, PRO104B, PRO24A, PRO24B, PRO85A, PRO85B, SER35A, SER35B, SER94A, SER94B, SER95A, SER95B, TRP26A, TRP26B, TRP64A, TRP64B, TRP76A, TRP76B, TYR102A, TYR102B, TYR18A, TYR18B, TYR41A, TYR41B, TYR44A, TYR44B, VAL100A, VAL100B, VAL10A, VAL10B, VAL32A, VAL32B, VAL56A, VAL56B, VAL7A, VAL7B, VAL93A, VAL93B
• A-C: ALA14A, ALA14C, ALA48A, ALA48C, ARG49A, ARG49C, ASN11A, ASN11C, ASN50A, ASN50C, ASP13A, ASP13C, ASP46A, ASP46C, GLN9A, GLN9C, GLU16A, GLU16C, HIS15A, HIS15C, LEU45A, LEU45C, LEU51A, LEU51C, LYS47A, LYS47C, PRO12A, PRO12C, PRO85A, PRO85C, VAL10A, VAL10C
• A-D: ALA48A, ARG49A, ARG49D, ASN87D, GLN9A, GLN9D, LEU51A, PRO88A, SER95A, VAL93A, VAL93D
• B-C: ALA48B, ARG49B, ARG49C, ASN87C, GLN9B, GLN9C, LEU51B, LEU51C, PRO88B, SER95C, VAL93B, VAL93C
• B-D: ALA14B, ALA14D, ALA48B, ALA48D, ARG49B, ARG49D, ASN11B, ASN11D, ASN50B, ASN50D, ASP13B, ASP13D, ASP46B, ASP46D, GLN9B, GLN9D, GLU16B, GLU16D, HIS15B, HIS15D, LEU45B, LEU45D, LEU51B, LEU51D, LYS47B, LYS47D, PRO12B, PRO12D, PRO85B, PRO85D, VAL10B, VAL10D, VAL93D
• C-D: ALA31C, ALA31D, ALA38C, ALA38D, ALA42C, ALA42D, ALA48C, ALA48D, ALA54C, ALA54D, ALA5C, ALA5D, ARG20C, ARG20D, ARG21C, ARG21D, ARG3C, ARG3D, ARG49C, ARG49D, ASN23C, ASN23D, ASN40C, ASN40D, ASN50C, ASN50D, ASP46C, ASP46D, GLN19C, GLN19D, GLN98C, GLN98D, GLN9C, GLN9D, GLU16C, GLU16D, GLU30C, GLU30D, GLU57C, GLU57D, GLU96C, GLU96D, GLU99C, GLU99D, HIS15C, HIS15D, HIS22C, HIS22D, HIS39C, HIS39D, ILE25C, ILE25D, ILE2C, ILE43C, ILE43D, LEU103C, LEU103D, LEU29C, LEU29D, LEU33C, LEU33D, LEU45C, LEU45D, LEU51C, LEU51D, LEU52C, LEU52D, LEU97C, LEU97D, LYS34C, LYS34D, LYS47C, LYS47D, LYS4C, LYS4D, MET1C, MET1D, MET55C, MET55D, MET8C, MET8D, PHE101C, PHE101D, PHE53C, PHE53D, PHE6C, PHE6D, PRO104C, PRO104D, PRO24C, PRO24D, PRO27C, PRO27D, PRO85C, PRO85D, SER35C, SER35D, SER94C, SER94D, SER95C, SER95D, TRP26C, TRP26D, TRP64C, TRP64D, TRP76C, TRP76D, TYR102C, TYR102D, TYR18C, TYR18D, TYR41C, TYR41D, TYR44C, TYR44D, VAL100C, VAL100D, VAL10C, VAL10D, VAL32C, VAL32D, VAL56C, VAL56D, VAL7C, VAL7D, VAL93C, VAL93D