1WF4
crystal structure of the chaperonin complex cpn60/cpn10/(adp)7 from thermus thermophilus
Total interactions analyzed 210
Total true interactions 56
Strongest Interaction Chains f-m
Int. Res. 34
Norm. En. per Res. -3.0603
Hub Node A(6)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
a-b -101.2115 -48.7501 -439.454 -589.4155 203 61 17 20603 7 82 75
a-g -91.1277 -45.4832 -427.69 -564.3009 199 39 18 20188 7 76 79
a-h -14.6621 -31.3305 -61.1651 -107.1576 45 2 2 2939 1 25 17
a-n 0.0 7.564 2 GLU461a, GLU461n
a-o -37.6431 -4.4513 8 ARG267a, ASN264a, GLU237a, GLY28o, LYS25o, LYS27o, THR26o, VAL31o
a-p 0.0 1.491 3 ASP34p, GLU309a, LYS307a
b-c -95.5391 -65.34 -411.967 -572.846 202 44 18 19938 7 86 92
b-h 0.0 7.4011 -35.5138 -28.1127 27 2 1 1572 0 4 7
b-i -10.3468 -28.7979 -61.9803 -101.125 44 2 2 2930 1 24 16
b-p -8.3404 -4.5128 6 ARG267b, GLU237b, GLY28p, LYS25p, LYS27p, THR26p
b-q -3.0678 -0.9469 5 ASP34q, LYS307b, LYS37q, PHE306b, THR35q
c-d -99.5226 -47.4981 -417.695 -564.7157 197 35 16 19751 7 82 78
c-i 0.0 8.5708 -31.1954 -22.6246 24 0 1 1431 0 4 6
c-j -10.6469 -28.8364 -65.4262 -104.9095 44 3 2 2950 1 25 16
c-q -9.2573 -17.3659 7 ARG230c, ASN264c, GLU237c, GLU38q, LYS27q, THR26q, VAL31q
c-r -8.7765 1.102 4 ASN310c, ASP34-8.7765303.123296, ASP34r, GLU309c
d-e -112.1863 -72.8213 -373.05 -558.0577 202 39 16 18897 8 89 93
d-j 0.0 8.5028 -27.8246 -19.3218 23 0 1 1356 0 3 6
d-k 0.0 -25.1416 -58.5118 -83.6534 44 2 2 2786 1 26 18
d-r -5.8552 -5.2629 3 GLU237d, GLY28-5.8552122.779058, LYS27r
d-s 0.0 1.3 3 ASP34s, GLU309d, LYS307d
e-f -90.0095 -37.9196 -418.13 -546.0591 202 57 17 20212 7 74 81
e-k 0.0 7.8488 -30.1625 -22.3137 24 0 1 1426 0 4 7
e-l -7.6239 -26.1819 -70.4062 -104.212 45 3 3 3112 1 28 18
e-s -54.2892 -48.6958 10 ARG230e, ARG267e, ASN264e, ASP34s, GLU237e, GLU256e, GLU38s, LYS25s, LYS27s, VAL31s
e-t -9.9102 2.9005 3 ASP34t, GLU309e, LYS307e
f-g -96.5426 -69.0265 -399.422 -564.9911 202 40 18 19437 6 88 90
f-l 0.0 8.0139 -28.6712 -20.6573 23 0 1 1343 0 4 7
f-m -12.276 -31.1399 -60.6335 -104.0494 34 4 4 2452 0 12 10
f-t -23.9824 -4.4881 8 ARG267f, ASN264f, GLU237f, GLY28t, LYS25t, LYS27t, THR26t, VAL31t
f-u 0.0 1.7862 4 ASP34u, GLU309f, LYS307f, LYS37u
g-m 0.0 7.39 0.0 7.39 2 0 0 0 0 0 0
g-n -14.5474 -31.5822 7 ASP435n, ASP9g, GLU10g, GLU433n, LYS105g, LYS105n, LYS441g
g-o 0.0 0.282 3 ASP34o, GLU309g, LYS307g
g-u -33.5114 -1.7689 10 ARG267g, ASN264g, GLU237g, GLU256g, GLY28u, LYS25u, LYS27u, LYS37u, THR26u, VAL31u
h-i -84.1315 -71.6008 -286.201 -441.9333 160 17 12 13919 4 62 67
h-n -71.1329 -78.5428 23 ALA521h, ARG267n, ARG284h, ARG36n, ASP282h, GLU256h, GLU385n, GLU41n, GLU520h, GLU525h, GLU59n, GLU61n, GLU63n, HIS65h, LYS180n, LYS276h, LYS28n, LYS42n, LYS43n, LYS4h, LYS526h, VAL39n, VAL523h
i-j -64.2649 -75.1871 -322.072 -461.5239 165 16 14 14414 5 67 70
j-k -83.8536 -73.5627 -326.329 -483.7453 168 18 13 14730 4 69 69
k-l -86.4905 -68.6959 -306.576 -461.7625 165 23 12 14498 4 62 64
l-m -102.3202 -66.8943 -138.82 -308.0346 108 17 4 6724 3 21 24
m-n -88.7056 -74.2417 24 ALA521n, ARG267m, ARG284n, ARG36m, ASN37m, ASP282n, GLU256n, GLU385m, GLU41m, GLU520n, GLU525n, GLU59m, GLU61m, GLU63m, HIS65n, LYS180m, LYS276n, LYS42m, LYS43m, LYS4n, LYS526n, THR518n, VAL39m, VAL523n
o-p -77.8399 -1.6108 18 ARG14p, ARG52o, ARG59p, ARG93o, ASP68o, GLN100o, GLU55o, GLU55p, GLU63o, GLU81p, GLU85p, GLY12p, LEU95o, LYS27o, LYS9p, VAL53p, VAL7p, VAL98o
o-q 0.0 7.7643 2 GLU55o, GLU55q
o-t 0.0 11.6387 2 GLU55o, GLU55t
o-u -47.5285 -21.1952 15 ARG14o, ARG59o, ARG93u, ASP68u, ASP83o, GLN100u, GLU55o, GLU55u, GLU63u, GLU81o, GLU85o, LYS27u, LYS9o, VAL7o, VAL98u
p-q -74.8004 2.8356 19 ARG14q, ARG52p, ARG93p, ASN56p, ASN56q, ASP68p, GLN100p, GLU55p, GLU55q, GLU81q, GLU85q, LEU11q, LEU95p, LEU96p, LYS27p, LYS9q, VAL53q, VAL7q, VAL98p
p-r 0.0 7.5761 2 GLU55p, GLU55r
p-u 0.0 1.0692 2 GLU55p, GLU55u
q-r -28.9519 15.0672 17 7-7.4401972.843753VAL, 9-8.3973842.743159LYS, ARG14-8.8762892.459637, ARG93q, ASP68q, ASP83r, GLN100q, GLU23q, GLU38q, GLU55q, GLU55r, GLU81r, LEU11-4.2379903.205774, LEU96q, LYS27q, LYS9r, VAL98q
r-s -76.7059 -8.7489 15 ARG59s, ARG93-2.8372232.816580, ASN56-27.6425622.225133, ASP68r, GLN100-11.0944902.821527, GLN100-13.0509422.858841, GLU55r, GLU55s, GLU63r, GLU81s, GLU85s, LYS27r, LYS9s, VAL98-13.5638112.685909, VAL98-8.5168912.680161
r-t 0.0 10.021 2 GLU55r, GLU55t
r-u 0.0 4.8239 2 GLU55r, GLU55u
s-t -51.1534 44.1804 19 ARG14t, ARG93s, ASN56s, ASP68s, ASP83t, GLN100s, GLU22s, GLU23s, GLU55s, GLU55t, GLU81t, GLU85t, LEU11t, LEU95s, LEU96s, LYS27s, LYS9t, VAL7t, VAL98s
s-u 0.0 8.2181 2 GLU55s, GLU55u
t-u -40.8993 -13.1109 15 ARG14u, ARG52t, ARG59u, ARG93t, ASN56t, ASN56u, ASP68t, GLU55t, GLU55u, GLU63t, GLU81u, LEU95t, LYS27t, LYS9u, VAL98t