1WCM
complete 12-subunit rna polymerase ii at 3.8 ang
Total interactions analyzed 66
Total true interactions 29
Strongest Interaction Chains C-L
Int. Res. 59
Norm. En. per Res. -4.2615
Hub Node B(10)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
Download
Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -401.3384 -294.7865 -2398.32 -3094.4448 751 243 61 106580 26 252 226
A-C -14.4093 9.9842 -66.6479 -71.073 50 8 0 3023 0 16 18
A-D 0.0 0.0 -8.442 -8.442 18 1 2 566 0 11 4
A-E -74.723 -79.0502 -512.806 -666.5791 204 53 14 23451 7 79 60
A-F -79.2963 -51.1649 -468.113 -598.5742 174 36 15 21295 3 61 55
A-G -10.8513 -66.2745 -106.544 -183.6698 66 11 4 5312 4 22 15
A-H -44.5814 -3.257 -353.144 -400.9824 136 40 13 16947 1 35 36
A-I -89.2601 -36.7337 -400.425 -526.4188 138 29 11 16380 5 49 47
A-K -22.7443 -35.5874 -243.714 -302.0458 89 18 8 9985 3 23 18
B-C -73.5786 -106.2524 -419.692 -599.5231 169 47 4 17543 8 53 60
B-D 0.0 0.0 -14.7718 -14.7718 28 0 1 1038 0 16 19
B-E 0.0 0.0 -0.0085 -0.0085 9 3 0 277 0 2 1
B-F 0.0 0.0 -12.7585 -12.7585 25 1 0 608 0 5 6
B-G -3.1994 -2.9998 -12.5878 -18.787 28 0 0 905 0 6 4
B-H 0.0 0.0 -0.3008 -0.3008 2 0 0 38 0 0 0
B-I -15.7275 -66.0783 -263.624 -345.4297 133 17 3 13219 1 51 49
B-J -27.774 -26.357 -383.776 -437.907 138 35 6 17902 3 34 36
B-K -4.2097 -11.9444 -81.2321 -97.3862 52 5 0 3286 2 16 18
B-L -51.7702 -78.0208 -207.399 -337.19 107 20 8 10685 8 45 45
C-H 0.0 -5.6517 -27.0366 -32.6883 25 0 1 1485 0 8 6
C-J -67.0179 -34.0804 -226.855 -327.9533 107 36 10 12299 6 39 24
C-K -41.7845 -29.895 -406.185 -477.8645 152 38 17 21734 4 47 46
C-L -36.8461 -74.538 -140.045 -251.429 59 11 9 5864 7 23 15
D-G -37.8914 6.1397 -444.23 -475.9816 195 53 20 22962 7 57 49
E-F -3.4925 -20.8285 -25.0972 -49.4181 20 3 0 1292 1 5 6
F-G -2.1855 -10.8573 -94.0163 -107.0591 50 4 1 4554 1 10 7
H-K 0.0 0.0 -31.9168 -31.9168 28 0 0 1867 0 5 5
J-L -5.881 0.0 -9.6813 -15.5624 9 0 0 531 0 1 1
K-L 0.0 8.2929 -1.1577 7.1352 5 0 0 152 0 2 2