1VT0
bacteriophage p22 portal protein bound to middle tail factor gp4. this file contain the second biological assembly
Total interactions analyzed 276
Total true interactions 84
Strongest Interaction Chains V-W
Int. Res. 435
Norm. En. per Res. -3.1517
Hub Node S(10)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
M-N -138.7362 -202.5607 -994.988 -1336.2849 431 64 18 44425 16 196 180
M-O -134.2755 -199.1413 -989.157 -1322.5738 432 61 17 44049 16 195 180
M-P 0.0 -2.1565 -2.166 -4.3225 21 0 0 274 0 4 7
M-V 0.0 -4.0124 -2.5938 -6.6062 21 0 0 313 0 4 7
M-k -12.7861 8.283 6 ARG131k, ARG54M, ASP325M, ASP339M, SER136k, TYR53M
M-l -5.7048 -39.0298 15 ARG122l, ARG125l, ARG90l, ASP364M, ASP378M, GLU112l, GLU354M, GLU360M, GLU379M, GLU46l, HIS361M, LYS108l, LYS111l, LYS124l, LYS52l
M-m -35.5131 18.149 8 ALA126m, ARG125m, ARG343M, ARG54M, ASN138m, GLY137m, TYR128m, TYR53M
M-n -42.4165 -38.8109 13 ARG125n, ARG376M, ASN380M, ASP367M, ASP368M, ASP378M, ASP383M, GLU112n, GLU379M, HIS85n, LYS102n, LYS108n, THR377M
N-O 0.0 -2.2539 -2.2552 -4.509 21 0 0 288 0 4 7
N-V -144.4473 -197.2384 -992.46 -1334.1457 433 72 17 44655 16 195 183
N-W 0.0 -3.9787 -2.6313 -6.61 22 0 0 321 0 4 8
N-k -39.3126 17.284 9 ALA126k, ARG125k, ARG343N, ARG54N, ASN138k, ASP339N, GLY137k, TYR128k, TYR53N
N-l -43.3286 -39.9763 13 ARG125l, ARG376N, ASN380N, ASP367N, ASP368N, ASP378N, ASP383N, GLU112l, GLU379N, HIS85l, LYS102l, LYS108l, THR377N
N-m -6.0185 -36.8262 15 ARG122m, ARG125m, ARG90m, ASP364N, ASP378N, GLU112m, GLU354N, GLU360N, GLU379N, GLU46m, HIS361N, LYS108m, LYS111m, LYS124m, LYS52m
N-v -14.2223 8.0929 6 ARG131v, ARG54N, ASP325N, ASP339N, SER136v, TYR53N
O-P -143.3092 -200.6065 -1011.58 -1355.4958 435 75 18 45605 16 201 183
O-Q 0.0 -2.6759 -2.1644 -4.8403 21 0 0 279 0 4 7
O-l -36.4898 18.1814 8 ALA126l, ARG125l, ARG343O, ARG54O, ASN138l, GLY137l, TYR128l, TYR53O
O-m -3.2446 8.353 3 ARG131m, ARG54O, ASP339O
O-n -3.6498 -39.1167 15 ARG122n, ARG125n, ARG90n, ASP364O, ASP378O, GLU112n, GLU354O, GLU360O, GLU379O, GLU46n, HIS361O, LYS108n, LYS111n, LYS124n, LYS52n
O-o -37.6149 -38.7217 13 ARG125o, ARG376O, ASN380O, ASP367O, ASP368O, ASP378O, ASP383O, GLU112o, GLU379O, HIS85o, LYS102o, LYS108o, THR377O
P-Q -135.2917 -200.6752 -998.772 -1334.739 433 69 18 44868 16 196 182
P-R 0.0 -4.7039 -2.2495 -6.9534 21 0 0 293 0 4 8
P-l -10.8604 7.8766 7 ARG131l, ARG54P, ASP325P, ASP339P, GLN52P, SER130l, SER136l
P-n -39.8733 17.0047 9 ALA126n, ARG125n, ARG343P, ARG54P, ASN138n, GLN52P, GLY137n, TYR128n, TYR53P
P-o -5.8055 -36.6499 15 ARG122o, ARG125o, ARG90o, ASP364P, ASP378P, GLU112o, GLU354P, GLU360P, GLU379P, GLU46o, HIS361P, LYS108o, LYS111o, LYS124o, LYS52o
P-p -36.3961 -38.5564 13 ARG125p, ARG376P, ASN380P, ASP367P, ASP368P, ASP378P, ASP383P, GLU112p, GLU379P, HIS85p, LYS102p, LYS108p, THR377P
Q-R -133.7948 -206.4898 -989.902 -1330.1866 435 73 17 44983 16 195 186
Q-X 0.0 -4.1937 -0.4905 -4.6843 12 0 0 81 0 2 5
Q-n -17.7453 7.9177 8 ARG131n, ARG54Q, ASP325Q, ASP339Q, GLN52Q, SER130n, SER136n, TYR53Q
Q-o -38.5363 17.7662 8 ALA126o, ARG125o, ARG343Q, ARG54Q, ASN138o, GLY137o, TYR128o, TYR53Q
Q-p -6.3075 -36.6907 15 ARG122p, ARG125p, ARG90p, ASP364Q, ASP378Q, GLU112p, GLU354Q, GLU360Q, GLU379Q, GLU46p, HIS361Q, LYS108p, LYS111p, LYS124p, LYS52p
Q-r -41.0445 -39.5698 18 ARG125-3.7496963.218826, ARG125r, ARG376Q, ASN380Q, ASP367Q, ASP368Q, ASP378Q, ASP383Q, GLU112-6.9030293.115915, GLU112-7.9612662.950319, GLU112r, GLU379Q, HIS85r, LYS102-10.8914942.766536, LYS102-11.5390592.714637, LYS102r, LYS108r, THR377Q
R-U 0.0 -4.0307 -2.6346 -6.6653 21 0 0 313 0 4 7
R-X -134.8868 -198.7855 -207.847 -541.5193 187 13 2 9901 2 81 77
R-o -13.6273 8.2831 6 ARG131o, ARG54R, ASP325R, ASP339R, SER136o, TYR53R
R-p -35.142 18.4883 8 ALA126p, ARG125p, ARG343R, ARG54R, ASN138p, GLY137p, TYR128p, TYR53R
R-q -41.5303 -38.6313 13 ARG125q, ARG376R, ASN380R, ASP367R, ASP368R, ASP378R, ASP383R, GLU112q, GLU379R, HIS85q, LYS102q, LYS108q, THR377R
R-r -3.6139 -38.8308 16 ARG122r, ARG125r, ARG90-3.6138912.945175, ARG90r, ASP364R, ASP378R, GLU112r, GLU354R, GLU360R, GLU379R, GLU46r, HIS361R, LYS108r, LYS111r, LYS124r, LYS52r
S-T -133.8564 -201.7092 -991.993 -1327.5586 433 60 18 44636 16 200 182
S-U -133.3643 -200.3568 -965.62 -1299.3411 429 53 17 43893 16 195 179
S-W 0.0 -2.1095 -2.1015 -4.211 21 0 0 274 0 4 7
S-X 0.0 -2.063 0.0 -2.063 3 0 0 0 0 0 0
S-q -13.247 8.0728 6 ARG131q, ARG54S, ASP325S, ASP339S, SER136q, TYR53S
S-s -16.6755 -35.0442 17 ALA126s, ARG122s, ARG125s, ARG90s, ASP364S, ASP378S, GLU112s, GLU354S, GLU360S, GLU379S, GLU46s, HIS361S, LYS108s, LYS111s, LYS124s, LYS52s, TYR115s
S-t -39.4741 17.5414 9 ALA126t, ARG125t, ARG343S, ARG54S, ASN138t, ASP339S, GLY137t, TYR128t, TYR53S
S-u -36.388 -39.1244 13 ARG125u, ARG376S, ASN380S, ASP367S, ASP368S, ASP378S, ASP383S, GLU112u, GLU379S, HIS85u, LYS102u, LYS108u, THR377S
T-U 0.0 -2.2393 -2.3091 -4.5484 20 0 0 286 0 4 6
T-V 0.0 -4.1597 -2.388 -6.5476 22 0 0 303 0 4 8
T-W -131.2292 -196.4155 -993.584 -1321.2287 432 64 17 44449 16 193 180
T-s -40.377 18.2186 9 ALA126s, ARG125s, ARG343T, ARG54T, ASN138s, ASP339T, GLY137s, TYR128s, TYR53T
T-t -13.9063 8.2454 6 ARG131t, ARG54T, ASP325T, ASP339T, SER136t, TYR53T
T-u -7.8781 -38.0501 16 ARG122u, ARG125u, ARG90u, ASP364T, ASP378T, GLU112u, GLU354T, GLU360T, GLU379T, GLU46u, HIS361T, LYS108u, LYS111u, LYS124u, LYS52u, TYR115u
T-v -36.5907 -38.8761 13 ARG125v, ARG376T, ASN380T, ASP367T, ASP368T, ASP378T, ASP383T, GLU112v, GLU379T, HIS85v, LYS102v, LYS108v, THR377T
U-X -139.3984 -200.9911 -417.041 -757.4305 263 20 4 20020 7 125 106
U-q -39.3684 17.1127 10 ALA126q, ARG125q, ARG343U, ARG54U, ASN138q, ASP339U, GLN52U, GLY137q, TYR128q, TYR53U
U-r -17.6893 8.023 10 ARG131-3.5389732.954599, ARG131-7.1314733.257084, ARG131r, ARG54U, ASP325U, ASP339U, GLN52U, SER130-3.8712433.238047, SER136-3.1476133.246829, TYR53U
U-s -36.1142 -36.7985 13 ARG125s, ARG376U, ASN380U, ASP367U, ASP368U, ASP378U, ASP383U, GLU112s, GLU379U, HIS85s, LYS102s, LYS108s, THR377U
U-t -11.8301 -36.133 16 ARG122t, ARG125t, ARG90t, ASP364U, ASP378U, GLU112t, GLU354U, GLU360U, GLU379U, GLU46t, HIS361U, LYS108t, LYS111t, LYS124t, LYS52t, TYR115t
V-W -148.67 -199.7394 -1022.6 -1371.0094 435 75 18 45227 16 193 182
V-k -6.133 -36.5978 15 ARG122k, ARG125k, ARG90k, ASP364V, ASP378V, GLU112k, GLU354V, GLU360V, GLU379V, GLU46k, HIS361V, LYS108k, LYS111k, LYS124k, LYS52k
V-m -37.2874 -35.9892 13 ARG125m, ARG376V, ASN380V, ASP367V, ASP368V, ASP378V, ASP383V, GLU112m, GLU379V, HIS85m, LYS102m, LYS108m, THR377V
V-u -14.6571 7.9708 6 ARG131u, ARG54V, ASP325V, ASP339V, SER136u, TYR53V
V-v -38.5722 17.5481 9 ALA126v, ARG125v, ARG343V, ARG54V, ASN138v, ASP339V, GLY137v, TYR128v, TYR53V
W-k -34.9918 -37.2905 13 ARG125k, ARG376W, ASN380W, ASP367W, ASP368W, ASP378W, ASP383W, GLU112k, GLU379W, HIS85k, LYS102k, LYS108k, THR377W
W-s -15.1599 8.1618 6 ARG131s, ARG54W, ASP325W, ASP339W, SER136s, TYR53W
W-u -43.6526 17.9395 10 ALA126u, ARG125u, ARG343W, ARG54W, ASN138u, ASP339W, GLN52W, GLY137u, TYR128u, TYR53W
W-v -7.2159 -38.6161 16 ARG122v, ARG125v, ARG90v, ASP364W, ASP378W, GLU112v, GLU354W, GLU360W, GLU379W, GLU46v, HIS361W, LYS108v, LYS111v, LYS124v, LYS52v, TYR115v
X-p -6.6186 8.3298 5 ARG131p, ARG54X, ASP325X, ASP339X, SER136p
X-q -13.2027 -39.0414 18 ARG122q, ARG125q, ARG90q, ASN380X, ASN86q, ASP364X, ASP378X, GLU112q, GLU354X, GLU360X, GLU379X, GLU46q, HIS361X, LYS108q, LYS111q, LYS124q, LYS52q, TYR115q
X-r -34.981 18.4161 8 ALA126-7.0568892.477346, ARG125r, ARG343X, ARG54X, ASN138-6.4961143.166672, GLY137-10.6451022.962501, TYR128-10.7829122.993889, TYR53X
X-t -39.6147 -37.7386 13 ARG125t, ARG376X, ASN380X, ASP367X, ASP368X, ASP378X, ASP383X, GLU112t, GLU379X, HIS85t, LYS102t, LYS108t, THR377X
k-m -4.3166 85.95 16 ARG15m, ARG76m, ARG90k, ASP22m, ASP27m, ASP35k, ASP38k, ASP39k, ASP50k, ASP94k, GLU46k, GLU98k, HIS85m, LYS102m, LYS111k, TYR109m
k-v 0.0 85.3064 14 ARG15k, ARG76k, ARG90v, ASP22k, ASP27k, ASP35v, ASP38v, ASP39v, ASP50v, ASP94v, GLU46v, GLU98v, HIS85k, LYS102k
l-m 0.0 84.8124 14 ARG15l, ARG76l, ARG90m, ASP22l, ASP27l, ASP35m, ASP38m, ASP39m, ASP50m, ASP94m, GLU46m, GLU98m, HIS85l, LYS102l
l-n -5.0873 84.2366 16 ARG15n, ARG76n, ARG90l, ASP22n, ASP27n, ASP35l, ASP38l, ASP39l, ASP50l, ASP94l, GLU46l, GLU98l, HIS85n, LYS102n, LYS111l, TYR109n
n-o -3.343 86.286 16 ARG15o, ARG76o, ARG90n, ASP22o, ASP27o, ASP35n, ASP38n, ASP39n, ASP50n, ASP94n, GLU46n, GLU98n, HIS85o, LYS102o, LYS111n, TYR109o
o-p -3.8367 87.6871 16 ARG15p, ARG76p, ARG90o, ASP22p, ASP27p, ASP35o, ASP38o, ASP39o, ASP50o, ASP94o, GLU46o, GLU98o, HIS85p, LYS102p, LYS111o, TYR109p
p-r -3.3965 85.1468 16 ARG15r, ARG76r, ARG90p, ASP22r, ASP27r, ASP35p, ASP38p, ASP39p, ASP50p, ASP94p, GLU46p, GLU98p, HIS85r, LYS102r, LYS111p, TYR109-3.3964752.995365
q-r -5.933 84.1708 16 ARG15q, ARG76q, ARG90r, ASP22q, ASP27q, ASP35r, ASP38r, ASP39r, ASP50r, ASP94r, GLN49-5.9330073.253578, GLU46r, GLU98r, HIS85q, LEU113q, LYS102q
q-t -9.7121 87.1716 18 ARG15t, ARG76t, ARG90q, ASP22t, ASP27t, ASP35q, ASP38q, ASP39q, ASP50q, ASP94q, GLN49q, GLU46q, GLU98q, HIS85t, LEU113t, LYS102t, LYS111q, TYR109t
s-t 0.0 84.6631 14 ARG15s, ARG76s, ARG90t, ASP22s, ASP27s, ASP35t, ASP38t, ASP39t, ASP50t, ASP94t, GLU46t, GLU98t, HIS85s, LYS102s
s-u -4.0697 85.3411 16 ARG15u, ARG76u, ARG90s, ASP22u, ASP27u, ASP35s, ASP38s, ASP39s, ASP50s, ASP94s, GLU46s, GLU98s, HIS85u, LYS102u, LYS111s, TYR109u
u-v -4.5098 83.6656 16 ARG15v, ARG76v, ARG90u, ASP22v, ASP27v, ASP35u, ASP38u, ASP39u, ASP50u, ASP94u, GLU46u, GLU98u, HIS85v, LYS102v, LYS111u, TYR109v