1VQL
the structure of the transition state analogue "dcsn" bound to the large ribosomal subunit of haloarcula marismortui
Total interactions analyzed 496
Total true interactions 27
Strongest Interaction Chains A-Z
Int. Res. 112
Norm. En. per Res. -4.0878
Hub Node C(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-M 0.0 0.0 -0.44 -0.44 4 0 0 84 0 0 3
A-Z -106.3657 -29.3658 -322.103 -457.8345 112 15 7 12833 2 26 24
B-J -7.5353 -20.6516 -40.7913 -68.9782 34 3 0 1945 0 3 0
B-K -6.9412 7.8315 -49.8775 -48.9872 39 3 0 2650 0 11 18
B-U -14.7263 6.8855 -40.7999 -48.6407 25 5 0 1344 0 5 5
C-L 0.0 0.0 -0.0031 -0.0031 2 0 0 4 0 0 3
C-O 0.0 4.4848 -41.6897 -37.2049 21 4 0 1632 0 8 6
C-T 0.0 0.8826 -13.4741 -12.5915 14 0 0 763 0 3 10
C-Y 0.0 0.0 -0.005 -0.005 2 0 0 4 0 0 0
C-1 -3.4029 -16.3941 -39.9805 -59.7775 16 3 0 1425 2 6 6
D-N -16.8081 -0.3613 -42.029 -59.1983 27 7 1 2248 0 13 20
E-J -13.7082 8.9156 -64.9699 -69.7625 24 8 1 2475 0 7 7
F-M -40.1913 -5.2451 -178.153 -223.5894 74 11 3 7936 4 23 26
H-Q 0.0 0.0 -0.0394 -0.0394 3 0 0 13 0 0 0
K-U -56.4971 -17.4291 -140.346 -214.2721 54 3 3 5666 1 17 20
L-M 0.0 0.0 -0.0137 -0.0137 2 0 0 11 0 0 1
L-O 0.0 0.0 -12.8807 -12.8807 25 0 0 933 0 5 6
L-Y 0.0 0.0 -11.7107 -11.7107 14 1 0 412 0 0 12
L-3 0.0 0.0 -3.575 -3.575 5 0 0 192 0 0 2
M-3 0.0 -2.1842 -26.2976 -28.4818 19 2 0 1534 0 4 1
N-Q -12.9426 4.9547 -95.233 -103.2209 55 6 3 4891 0 10 17
R-X 0.0 0.0 -0.0584 -0.0584 3 0 0 6 0 0 8
R-2 0.0 0.0 -0.062 -0.062 3 0 0 26 0 0 1
S-V 0.0 -3.1126 -54.2738 -57.3864 39 4 4 2927 1 11 13
S-2 -19.6282 -4.635 -50.1799 -74.4431 25 4 0 2326 1 19 11
T-2 0.0 0.0 -0.0202 -0.0202 3 0 0 5 0 2 2
1-2 0.0 -6.0104 -42.9577 -48.9681 24 9 0 1758 0 19 16