1VQ9
the structure of cca-phe-cap-bio and the antibiotic sparsomycin bound to the large ribosomal subunit of haloarcula marismortui
Total interactions analyzed 496
Total true interactions 27
Strongest Interaction Chains A-Z
Int. Res. 116
Norm. En. per Res. -4.0051
Hub Node C(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-M 0.0 0.0 -0.2323 -0.2323 5 0 0 67 0 0 3
A-Z -105.3616 -32.2398 -326.995 -464.5964 116 28 8 13187 2 26 24
B-J -11.7889 -22.4045 -49.3121 -83.5055 34 3 0 2000 1 4 0
B-K -10.7221 7.4195 -53.1507 -56.4533 39 2 0 2620 0 11 18
B-U -16.9881 7.3357 -37.7305 -47.3829 26 5 0 1342 0 5 5
C-L 0.0 0.0 -0.0036 -0.0036 2 0 0 5 0 0 3
C-O 0.0 4.4547 -43.7861 -39.3314 23 5 0 1652 0 7 6
C-T 0.0 0.854 -13.3584 -12.5044 14 0 0 768 0 3 10
C-Y 0.0 0.0 -0.0083 -0.0083 2 0 0 7 0 0 0
C-1 0.0 -14.9362 -44.7712 -59.7074 16 4 0 1463 1 6 6
D-N -20.2084 3.2706 -48.8991 -65.8369 27 6 1 2264 0 12 20
E-J -14.0326 10.0344 -68.0023 -72.0005 24 6 1 2466 0 7 7
F-M -36.9391 -6.4514 -179.877 -223.2674 73 11 3 7899 4 23 26
H-Q 0.0 0.0 -0.0293 -0.0293 3 0 0 9 0 0 0
K-U -50.4538 -18.8836 -139.351 -208.6884 53 6 3 5713 1 17 19
L-M 0.0 0.0 -0.0136 -0.0136 2 0 0 11 0 0 1
L-O 0.0 0.0 -12.8764 -12.8764 24 0 0 957 0 5 6
L-Y 0.0 0.0 -11.0027 -11.0027 14 0 0 392 0 0 12
L-3 0.0 0.0 -3.374 -3.374 5 0 0 184 0 0 2
M-3 0.0 -2.4009 -26.0678 -28.4687 19 5 0 1552 0 4 0
N-Q -6.8263 5.1476 -94.6725 -96.3513 53 4 3 4875 0 11 17
R-X 0.0 0.0 -0.0462 -0.0462 2 0 0 3 0 0 8
R-2 0.0 0.0 -0.075 -0.075 3 0 0 29 0 0 1
S-V -8.6751 -9.809 -55.2271 -73.7112 39 5 4 2919 1 11 12
S-2 -19.2971 -3.9513 -46.4651 -69.7135 26 4 0 2330 1 19 11
T-2 0.0 0.0 -0.0159 -0.0159 3 0 0 5 0 2 2
1-2 0.0 -6.6957 -37.9881 -44.6838 23 5 0 1744 0 19 16