1VPH

crystal structure of a ybjq-like protein of unknown function (sso2532) from sulfolobus solfataricus p2 at 1.76 a resolution

• Total interactions analyzed: 15
• Total true interactions: 12
• Strongest Interaction:
  • Chains: E-F
  • Int. Res.: 136
  • Norm. En. per Res.: -4.4197
• Hub Node: A(5)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-70.7291	-67.6963	-421.429	-559.8544	132	13	12	15995	13	45	48
A-C	-68.2086	-47.6052	-415.139	-530.9528	139	9	11	15876	10	46	58
A-D	0.0	46.3668	-26.5443	19.8225	13	1	0	999	0	12	10
A-E	-10.629	0.534	-19.287	-29.382	14	1	0	637	0	14	10
A-F	0.0	0.0	-0.9584	-0.9584	9	0	0	111	0	5	7
B-C	-60.2661	-49.4836	-443.612	-553.3617	133	9	12	16877	10	47	52
B-D	-26.7767	2.6937	-25.6632	-49.7462	19	2	0	810	0	15	11
C-D	0.0	0.0	-1.4406	-1.4406	10	0	0	160	0	7	7
C-F	0.0	0.0	-13.1354	-13.1354	14	1	0	745	0	4	6
D-E	-66.5054	-52.4305	-425.929	-544.8648	128	14	12	16276	12	44	50
D-F	-71.4033	-59.3945	-425.937	-556.7349	134	12	12	16721	13	47	58
E-F	-76.2146	-85.9886	-438.88	-601.0833	136	11	12	16635	9	50	57

Interface residues

• A-B: ALA44A, ALA48A, ALA49A, ALA52B, ALA86A, ALA88A, ALA92A, ALA97A, ARG104B, ARG110B, ARG125A, ARG128A, ARG57B, ARG75A, ARG99A, ARG99B, ASN115B, ASN36B, ASN53B, ASN80A, ASN85A, ASP62B, ASP6A, ASP7A, ASP83A, CB8.06714-11.65106, CYS39A, CYS39B, GLN114B, GLU105B, GLU133A, GLU137B, GLU54B, GLU56B, GLU61B, GLU69A, GLU69B, GLU72A, GLU98A, GLU98B, GLY106B, GLY111B, GLY136A, GLY136B, GLY37B, GLY58B, GLY91A, GLY91B, GLY96A, GLY96B, HIS0A, HIS0A5, HIS129A, HIS45A, HIS55B, HIS79A, HIS87A, HIS89A, ILE116B, ILE130A, ILE134A, ILE134B, ILE34B, ILE38A, ILE38B, ILE41A, ILE41B, ILE50B, ILE63B, ILE67A, ILE67B, ILE82A, ILE8A, LEU108B, LEU121A, LEU121B, LEU135A, LEU135B, LEU18B, LEU40A, LEU40B, LEU59B, LEU64B, LEU81A, LEU90A, LEU90B, LEU95A, LEU95B, LYS107B, LYS2A, LYS2B, LYS35B, LYS66A, LYS66B, LYS68A, LYS68B, LYS78A, MET1A, MET1B, MET60B, PHE101B, PHE117B, PHE42A, PHE5A, PHE70A, PHE70B, PHE94A, PHE94B, PRO102B, SER46A, SER76A, THR112B, THR131A, THR47A, THR65B, THR71A, THR71B, THR93A, TRP113B, TRP77A, TYR4A, TYR9A, VAL100A, VAL100B, VAL103B, VAL109B, VAL119B, VAL132A, VAL3A, VAL3B, VAL43A, VAL51B
• A-C: ALA44C, ALA48C, ALA49C, ALA52A, ALA86C, ALA88C, ALA92C, ALA97C, ARG104A, ARG110A, ARG125C, ARG128C, ARG57A, ARG75C, ARG99A, ARG99C, ASN115A, ASN36A, ASN53A, ASN80C, ASN85C, ASP62A, ASP6C, ASP7C, ASP83C, CB5.629692.65397, CB6.633891.08441, CB9.047796.27118, CYS39A, CYS39C, GLN114A, GLU105A, GLU133C, GLU137A, GLU54A, GLU56A, GLU61A, GLU69A, GLU69C, GLU72C, GLU98A, GLU98C, GLY106A, GLY111A, GLY136A, GLY136C, GLY37A, GLY58A, GLY91A, GLY91C, GLY96A, GLY96C, HIS-1C, HIS-2C, HIS-4C, HIS0A, HIS0A5, HIS0C, HIS129C, HIS45C, HIS55A, HIS79C, HIS87C, HIS89C, ILE116A, ILE130C, ILE134A, ILE134C, ILE34A, ILE34C, ILE38A, ILE38C, ILE41A, ILE41C, ILE50A, ILE63A, ILE67A, ILE67C, ILE82C, ILE8C, LEU108A, LEU121A, LEU121C, LEU135A, LEU135C, LEU18A, LEU40A, LEU40C, LEU59A, LEU64A, LEU81C, LEU90A, LEU90C, LEU95A, LEU95C, LYS107A, LYS2A, LYS2C, LYS35A, LYS66A, LYS66C, LYS68A, LYS68C, LYS78C, MET1A, MET1C, MET60A, PHE101A, PHE117A, PHE42C, PHE5C, PHE70A, PHE70C, PHE94A, PHE94C, PRO102A, SER46C, SER76C, THR112A, THR131C, THR47C, THR65A, THR71A, THR71C, THR93C, TRP113A, TRP77C, TYR4C, TYR9C, VAL100A, VAL100C, VAL103A, VAL109A, VAL119A, VAL132C, VAL3A, VAL3C, VAL43C, VAL51A
• A-D: ARG75A, ARG75D, GLU69A, GLU69D, GLU72A, GLU72D, SER74A, SER74D, SER76A, SER76D, THR65D, TRP77A, TRP77D
• A-E: ARG75A, ASN80A, GLU69E, GLU72A, GLU72E, LYS66E, LYS68E, PHE70E, PRO73A, PRO73E, SER74A, SER76A, THR65E, TRP77A
• A-F: ARG75F, GLU61A, GLU69A, GLU72F, LYS66F, SER74A, SER74F, SER76F, THR65A
• B-C: ALA44B, ALA48B, ALA49B, ALA52C, ALA86B, ALA88B, ALA92B, ALA97B, ARG104C, ARG110C, ARG125B, ARG128B, ARG57C, ARG75B, ARG99B, ARG99C, ASN115C, ASN36C, ASN53C, ASN80B, ASN85B, ASP62C, ASP6B, ASP7B, ASP83B, CYS39B, CYS39C, GLN114C, GLU105C, GLU133B, GLU137B, GLU137C, GLU54C, GLU56C, GLU61C, GLU69B, GLU69C, GLU72B, GLU98B, GLU98C, GLY106C, GLY111C, GLY136B, GLY136C, GLY37C, GLY58C, GLY91B, GLY91C, GLY96B, GLY96C, HIS-1C, HIS-2C, HIS0C, HIS129B, HIS45B, HIS55C, HIS79B, HIS87B, HIS89B, ILE116C, ILE130B, ILE134B, ILE134C, ILE34C, ILE38B, ILE38C, ILE41B, ILE41C, ILE50C, ILE63C, ILE67B, ILE67C, ILE82B, ILE8B, LEU108C, LEU121B, LEU121C, LEU135B, LEU135C, LEU18C, LEU40B, LEU40C, LEU59C, LEU64C, LEU81B, LEU90B, LEU90C, LEU95B, LEU95C, LYS107C, LYS2B, LYS2C, LYS35C, LYS66B, LYS66C, LYS68B, LYS68C, LYS78B, MET1B, MET1C, MET60C, PHE101C, PHE117C, PHE42B, PHE5B, PHE70B, PHE70C, PHE94B, PHE94C, PRO102C, SER46B, SER76B, THR112C, THR131B, THR47B, THR65C, THR71B, THR71C, THR93B, TRP113C, TRP77B, TYR4B, TYR9B, VAL100B, VAL100C, VAL103C, VAL109C, VAL119C, VAL132B, VAL3B, VAL3C, VAL43B, VAL51C
• B-D: ARG75B, ARG75D, ASN80D, ASP84D, GLU69B, GLU72B, GLU72D, LEU81D, LYS66B, LYS68B, PHE70B, PRO73B, PRO73D, SER74B, SER74D, SER76D, THR65B, THR71B, TRP77D
• C-D: ARG75C, ASP62D, GLU61D, GLU69D, GLU72C, LYS66C, SER74C, SER74D, SER76C, THR65D
• C-F: ARG75C, ARG75F, GLU72C, GLU72F, LEU81C, LEU81F, LYS78C, LYS78F, SER74C, SER74F, SER76C, SER76F, TRP77C, TRP77F
• D-E: ALA44D, ALA48D, ALA49D, ALA52E, ALA86D, ALA88D, ALA92D, ALA97D, ARG104E, ARG110E, ARG125D, ARG128D, ARG57E, ARG75D, ARG99D, ARG99E, ASN115E, ASN36E, ASN53E, ASN80D, ASN85D, ASP62E, ASP6D, ASP7D, ASP83D, CYS39D, CYS39E, GLN114E, GLU105E, GLU133D, GLU137E, GLU54E, GLU56E, GLU61E, GLU69D, GLU69E, GLU72D, GLU98D, GLU98E, GLY106E, GLY111E, GLY136D, GLY136E, GLY37E, GLY58E, GLY91D, GLY91E, GLY96D, GLY96E, HIS0D, HIS0E, HIS129D, HIS45D, HIS55E, HIS79D, HIS87D, HIS89D, ILE116E, ILE130D, ILE134D, ILE34E, ILE38D, ILE38E, ILE41D, ILE50E, ILE63E, ILE67D, ILE67E, ILE82D, ILE8D, LEU108E, LEU121D, LEU121E, LEU135D, LEU135E, LEU18E, LEU40D, LEU40E, LEU59E, LEU64E, LEU81D, LEU90D, LEU90E, LEU95D, LEU95E, LYS107E, LYS2D, LYS2E, LYS35E, LYS66D, LYS66E, LYS68D, LYS68E, LYS78D, MET1D, MET1E, MET60E, PHE101E, PHE117E, PHE42D, PHE5D, PHE70D, PHE70E, PHE94D, PHE94E, PRO102E, SER46D, SER76D, THR112E, THR131D, THR47D, THR65E, THR71D, THR71E, THR93D, TRP113E, TRP77D, TYR4D, TYR9D, VAL100D, VAL100E, VAL103E, VAL109E, VAL119E, VAL132D, VAL3D, VAL43D, VAL51E
• D-F: ALA44F, ALA48F, ALA49F, ALA52D, ALA86F, ALA88F, ALA92F, ALA97F, ARG104D, ARG110D, ARG125F, ARG128F, ARG57D, ARG75F, ARG99D, ARG99F, ASN115D, ASN36D, ASN53D, ASN80F, ASN85F, ASP62D, ASP6F, ASP7F, ASP83F, CYS39D, CYS39F, GLN114D, GLU105D, GLU133F, GLU137D, GLU54D, GLU56D, GLU61D, GLU69D, GLU69F, GLU72F, GLU98D, GLU98F, GLY106D, GLY111D, GLY136D, GLY136F, GLY37D, GLY58D, GLY91D, GLY91F, GLY96D, GLY96F, HIS-1F, HIS-4F, HIS0D, HIS0F, HIS129F, HIS45F, HIS55D, HIS79F, HIS87F, HIS89F, ILE116D, ILE130F, ILE134D, ILE134F, ILE34D, ILE38D, ILE38F, ILE41D, ILE41F, ILE50D, ILE63D, ILE67D, ILE67F, ILE82F, ILE8F, LEU108D, LEU121D, LEU121F, LEU135D, LEU135F, LEU18D, LEU40D, LEU40F, LEU59D, LEU64D, LEU81F, LEU90D, LEU90F, LEU95D, LEU95F, LYS107D, LYS2D, LYS2F, LYS35D, LYS66D, LYS66F, LYS68D, LYS68F, LYS78F, MET1D, MET1F, MET60D, PHE101D, PHE117D, PHE42F, PHE5F, PHE70D, PHE70F, PHE94D, PHE94F, PRO102D, PRO73F, SER46F, SER76F, THR112D, THR131F, THR47F, THR65D, THR71D, THR71F, THR93F, TRP113D, TRP77F, TYR4F, TYR9F, VAL100D, VAL100F, VAL103D, VAL109D, VAL119D, VAL132F, VAL3D, VAL3F, VAL43F, VAL51D
• E-F: ALA44E, ALA48E, ALA49E, ALA52F, ALA86E, ALA88E, ALA92E, ALA97E, ARG104F, ARG110F, ARG125E, ARG128E, ARG57F, ARG75E, ARG99E, ARG99F, ASN115F, ASN36F, ASN53F, ASN80E, ASN85E, ASP62F, ASP6E, ASP7E, ASP83E, CYS39E, CYS39F, GLN114F, GLU105F, GLU133E, GLU137E, GLU137F, GLU54F, GLU56F, GLU61F, GLU69E, GLU69F, GLU72E, GLU98E, GLU98F, GLY106F, GLY111F, GLY136E, GLY136F, GLY37E, GLY37F, GLY58F, GLY91E, GLY91F, GLY96E, GLY96F, HIS-1F, HIS-2F, HIS0E, HIS0F, HIS129E, HIS45E, HIS55F, HIS79E, HIS87E, HIS89E, ILE116F, ILE130E, ILE134E, ILE134F, ILE34F, ILE38E, ILE38F, ILE41E, ILE41F, ILE50E, ILE50F, ILE63F, ILE67E, ILE67F, ILE82E, ILE8E, LEU108F, LEU121E, LEU121F, LEU135E, LEU135F, LEU18F, LEU40E, LEU40F, LEU59F, LEU64F, LEU81E, LEU90E, LEU90F, LEU95E, LEU95F, LYS107F, LYS2E, LYS2F, LYS35F, LYS66E, LYS66F, LYS68E, LYS68F, LYS78E, MET1E, MET1F, MET60F, PHE101F, PHE117F, PHE42E, PHE5E, PHE70E, PHE70F, PHE94E, PHE94F, PRO102F, SER46E, SER76E, THR112F, THR131E, THR47E, THR65F, THR71E, THR71F, THR93E, TRP113F, TRP77E, TYR4E, TYR9E, VAL100E, VAL100F, VAL103F, VAL109F, VAL119F, VAL132E, VAL3E, VAL3F, VAL43E, VAL51F