1VOY
crystal structure of five 70s ribosomes from escherichia coli in complex with protein y. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains five 70s ribosomes and is described in remark 400.
Total interactions analyzed 496
Total true interactions 32
Strongest Interaction Chains E-L
Int. Res. 11
Norm. En. per Res. -1.8061
Hub Node E(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
E-K -11.2202 0.0 456.323 445.1028 21 62 1 1420 0 1 4
E-L 0.0 -6.6397 -13.2277 -19.8674 11 0 0 628 0 5 5
E-O 0.0 0.0 -0.6353 -0.6353 5 0 0 129 0 0 6
E-Q -25.4841 -19.2106 108.926 64.2313 86 74 6 8249 4 12 23
F-M 0.0 15.9876 10.3586 26.3462 30 6 0 1106 0 11 18
F-R 0.0 4.3261 -3.6151 0.711 13 0 0 470 0 0 2
H-6 0.0 0.0 -0.5506 -0.5506 7 0 0 134 0 0 5
I-1 0.0 -5.3734 -0.247 -5.6205 7 0 0 64 0 2 2
I-7 0.0 0.0 -0.0226 -0.0226 5 0 0 27 0 2 1
J-N 0.0 0.0 -0.0035 -0.0035 2 0 0 2 0 0 1
J-W 0.0 0.0 -0.2228 -0.2228 6 0 0 70 0 1 2
K-R 0.0 3.1172 -14.4397 -11.3225 32 6 1 1919 0 5 17
K-S 0.0 0.0 -0.1602 -0.1602 4 0 0 69 0 0 1
K-6 0.0 3.6125 -0.662 2.9504 6 0 0 115 0 2 6
L-Q -106.0427 32.9465 847.552 774.4557 77 219 2 8693 3 30 39
M-R 0.0 0.0 -0.0247 -0.0247 4 0 0 20 0 0 3
M-S 0.0 16.1541 -17.004 -0.8499 11 0 0 905 0 0 9
M-5 0.0 22.8905 -27.7609 -4.8704 47 29 0 3812 0 7 35
N-W -13.7093 -24.921 648.172 609.5417 77 221 11 9039 2 19 23
N-X 0.0 0.0 -1.4157 -1.4157 5 0 0 154 0 0 1
N-6 0.0 0.0 -0.0588 -0.0588 4 0 0 20 0 1 3
O-T 0.0 -11.8335 -13.5476 -25.3811 15 0 0 737 0 4 5
O-2 0.0 6.9894 -9.0716 -2.0822 20 1 0 682 0 1 6
P-X 0.0 7.8019 -5.8368 1.9651 16 0 0 581 0 1 8
R-S -9.2092 -31.5515 78.1981 37.4374 85 32 3 5831 3 18 42
R-2 0.0 0.0 -1.5224 -1.5224 7 0 0 175 0 0 6
T-V 0.0 0.0 -0.0006 -0.0006 2 0 0 2 0 0 0
T-2 0.0 -4.8728 -8.1865 -13.0593 32 0 0 972 1 11 17
U-Y -43.2437 1.787 1994.99 1953.5332 52 236 3 5451 0 12 12
V-Y 0.0 0.0 -1.6414 -1.6414 5 0 0 198 0 0 0
1-4 0.0 0.0 -0.0071 -0.0071 2 0 0 4 0 0 1
3-5 0.0 0.0 9.1138 9.1138 18 9 0 822 0 1 0