1VOR
crystal structure of five 70s ribosomes from escherichia coli in complex with protein y. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains five 70s ribosomes and is described in remark 400.
Total interactions analyzed 496
Total true interactions 32
Strongest Interaction Chains O-T
Int. Res. 14
Norm. En. per Res. -1.7296
Hub Node E(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
E-K 0.0 0.0 -11.1911 -11.1911 21 0 0 631 0 1 2
E-L 0.0 13.8056 50.4239 64.2295 13 9 0 742 0 4 4
E-O 0.0 0.0 -3.7513 -3.7513 8 0 0 443 0 0 6
E-Q -233.3471 -66.6618 1087.68 787.6711 96 345 6 14518 4 15 33
F-M 0.0 16.4967 -8.3791 8.1176 31 0 0 825 0 12 17
F-R 0.0 0.0 -1.2261 -1.2261 7 0 0 241 0 0 1
F-T 0.0 0.0 -0.9719 -0.9719 5 0 0 73 0 0 0
F-4 0.0 0.0 -0.0402 -0.0402 2 0 0 22 0 0 5
H-6 0.0 0.0 -0.0797 -0.0797 5 0 0 28 0 0 3
I-1 0.0 -13.144 -7.2715 -20.4155 20 0 0 573 0 7 7
J-W 0.0 0.0 -2.4034 -2.4034 8 0 0 230 0 1 3
K-R 0.0 5.477 -16.0846 -10.6076 30 0 1 1379 0 5 15
K-S 0.0 0.0 -0.2595 -0.2595 3 0 0 85 0 0 1
K-6 0.0 1.1294 -0.0695 1.0598 5 0 0 22 0 2 6
L-Q -157.3244 21.604 1602.98 1467.2596 80 323 2 10105 5 33 38
M-S 0.0 24.9534 -23.0891 1.8642 12 2 0 977 0 0 9
M-1 0.0 0.0 -0.0072 -0.0072 2 0 0 7 0 0 1
M-5 0.0 32.7395 280.585 313.3245 53 42 0 4685 0 8 36
N-W -39.705 -1.402 749.893 708.786 95 233 10 13759 0 25 33
N-X 0.0 0.0 -0.3527 -0.3527 6 0 0 84 0 0 1
N-6 0.0 0.0 -0.4232 -0.4232 7 0 0 86 0 3 4
O-T 0.0 -16.9662 -7.2477 -24.214 14 0 0 484 1 4 5
O-2 0.0 18.7081 16.1571 34.8652 25 13 0 1333 0 2 7
P-X 0.0 0.0 -0.7096 -0.7096 14 0 0 190 0 1 4
R-S -5.513 -9.3811 -64.9432 -79.8373 82 16 4 5520 2 17 37
R-2 0.0 0.0 36.8129 36.8129 11 10 0 469 0 0 5
T-V 0.0 0.0 -0.0106 -0.0106 2 0 0 8 0 0 1
T-2 0.0 -22.9517 -8.8898 -31.8416 35 0 1 1116 1 14 24
U-Y -3.1652 -1.7149 -67.2491 -72.1292 44 19 3 4178 0 11 9
1-4 0.0 0.0 -0.0103 -0.0103 2 0 0 8 0 0 1
1-5 0.0 0.0 -0.0027 -0.0027 2 0 0 4 0 0 0
3-5 0.0 0.0 -3.1818 -3.1818 11 0 0 329 0 0 0