1VGK

the crystal structure of class i major histocompatibility complex, h-2kd at 2.0 a resolution

• Total interactions analyzed: 3
• Total true interactions: 2
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 123
  • Norm. En. per Res.: -4.1396
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-43.753	-93.0294	-372.39	-509.1725	123	8	2	12872	4	42	37
A-C	-27.5495	0.0	-321.85	-349.3995	88	20	6	10778	0	0	0

Interface residues

• A-B: ALA117A, ALA11A, ALA125A, ALA236A, ALA246A, ALA24A, ARG111A, ARG121A, ARG12B, ARG14A, ARG202A, ARG21A, ARG234A, ARG35A, ARG3B, ARG48A, ARG6A, ARG97A, ARG97B, ASN21B, ASN24B, ASP119A, ASP122A, ASP238A, ASP30A, ASP34B, ASP37A, ASP53B, ASP59B, ASP96B, ASP98B, CYS25B, GLN114A, GLN115A, GLN242A, GLN2B, GLN32A, GLN8B, GLN96A, GLU229A, GLU232A, GLU46A, GLU50B, GLY120A, GLY207A, GLY237A, GLY239A, GLY26A, GLY29B, HIS13B, HIS188A, HIS192A, HIS31B, HIS51B, HIS93A, ILE124A, ILE1B, ILE23A, ILE7B, LEU17A, LEU206A, LEU230A, LEU54B, LEU64B, LEU65B, LYS186A, LYS243A, LYS58B, LYS6B, MET98A, MET99B, PHE116A, PHE22A, PHE22B, PHE241A, PHE30B, PHE36A, PHE56B, PHE62B, PHE74A, PHE8A, PHE95A, PHE99A, PRO14B, PRO235A, PRO32B, SER11B, SER13A, SER28B, SER33B, SER52B, SER55B, SER57B, SER61B, SER92A, THR10A, THR190A, THR200A, THR233A, THR240A, THR94A, TRP204A, TRP244A, TRP60B, TRP95B, TYR10B, TYR113A, TYR118A, TYR123A, TYR191A, TYR26B, TYR27A, TYR63B, TYR66B, TYR67B, TYR7A, VAL12A, VAL231A, VAL25A, VAL27B, VAL34A, VAL9A, VAL9B
• A-C: ALA139A, ALA140A, ALA150A, ALA153A, ALA24A, ALA67A, ALA81A, ARG144A, ARG170A, ARG66A, ARG79A, ARG83A, ARG97A, ASN4C, ASN6C, ASP152A, ASP70A, CYS101A, CYS164A, GLN114A, GLN149A, GLN63A, GLN65A, GLN72A, GLN82A, GLU148A, GLU154A, GLU163A, GLU166A, GLU55A, GLU62A, GLU71A, GLY100A, GLY151A, GLY26A, GLY8C, ILE124A, ILE142A, ILE23A, LEU160A, LEU168A, LEU5A, LEU78A, LEU9C, LYS146A, LYS68A, MET52A, MET7C, PHE116A, PHE22A, PHE33A, PHE36A, PHE45A, PHE74A, PHE8A, PHE95A, PHE99A, SER1C, SER69A, SER77A, THR10A, THR143A, THR5C, THR64A, THR80A, TRP133A, TRP147A, TRP167A, TRP73A, TYR113A, TYR118A, TYR123A, TYR155A, TYR156A, TYR159A, TYR171A, TYR2C, TYR59A, TYR7A, TYR84A, TYR85A, VAL165A, VAL25A, VAL28A, VAL34A, VAL3C, VAL76A, VAL9A